RIKEN Arabidopsis Genome Encyclopedia

cDNAs

Arabidopsis full-length cDNA information is available and searchable by gene description, gene name, and cDNA clone name.

Lines

Information regarding Arabidopsis transposon mutant lines and overexpressed lines is available and searchable by gene description, gene name, and line name.

Phenotypes

An advanced search function with an ontology tree of phenotypes for transposon mutant lines and overexpressed lines has been provided.

About RARGE

RIKEN Arabidopsis Genome Encyclopedia (commonly known as RARGE) is a Web database that provides basic information about the Arabidopsis genome, such as information related to cDNA sequences and transposon insertion mutants. More...

Publications

  • Akiyama et al. (2014) RARGE II: An Integrated Phenotype Database of Arabidopsis Mutant Traits Using a Controlled Vocabulary. Plant Cell Physiol. 55, e4 [PubMed]
  • Sakurai et al. (2005) RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome. Nucleic Acids Res. 33, D647-D650 [PubMed]

Related projects

Alternative Splicing(Closed)
Database of alternative splicing events based on analysis of full-length cDNAs
RIKEN Arabidopsis Transcription Factor (RARTF) database(Closed)
Database of Arabidopsis transcription factors based on computer prediction
Chloroplast Function Database(Closed)
Database of Arabidopsis knockout mutants and their phenotypes for nuclear-encoded chloroplast proteins
RIKEN Arabidopsis Phenome Information Database (RAPID)(Closed)
Database of phenotypes of Ds transposon insertion lines