K38604

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38604

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38604

Determination of introduced cDNA(s)

  • J013153L21 - Rice Full-length cDNAs - Original: J013153L21

    full reading [+] show sequence

    Nucleotide sequence: J013153L21 - full reading 
    GTCTTCTTCC TCTCGCCGCC GCAGCGCGCG GCCGCCACTC CATCCACCAC 
    AATGGCGAAC CCCACGTCCC ACCGCCTCCT CCTCGCCGCG TAGCCCTATC 
    GGCGAGCCGC TGCCGGTGGC TTCTCGGCAT CCCCGCGCCG TAGAGTCTCC 
    GCCGCCGCCG TGTGCTCCGC AACATTGGGG TCGAGGGTTT TCGATTCGGC 
    GAAGGGGGGG GGGGGGGGGG AAAGCTCGTC CCGTGGGAGG CGCCATGGGG 
    AGCGAGGCGA AGGAGATGAA GTACAGGAGA AGGGCTAGGG TTCCAGAGCC 
    CTTCGATTAC GGGCAATGCG GCGGCGACCG GAGTGGCGTG CTGGATTGGG 
    GCGCGCTCAA GGAGAACCCC GTGGAGCTGC TCCGGAAGCT CGACGAGCTG 
    CGGGACCACA TCACCAGGTC CTGCGAGATC ACCGACCAGC CGCGGGAGCG 
    CCACCGCATG AGCCGCCGCA CGGCCTCGCT GCGCCCCTCG CACGCCGAGC 
    CGCCGCCGCT AGGCCGTGGG CCGGAGCACT ACCGCTCACG CTACACGGGA 
    AGGTACGGGT CTGGCTTTCC GCACAGTCCG AATGACCAGC TGCATCGGTC 
    TATGCATAGA GATAGGTATG AGAGGCAGCC GAGTGGGCGG TTCCGGCAAT 
    GGCCGGAGAG GCAGTGGGAG AATTCTGGGT ATCTTGGGGG GAATCACCAT 
    CAGAGCACCT GCCAGTGTGC ACAGTGCCTT CATGGCCAGA GAGCTGTGAT 
    GCAGGAGGAG CACATTCCCA TGACGAGGTA CTTTGCAGGC CAGCAGGGGT 
    CTCACCTGTT CGATAGGTCC CCATCAGTCT CATCGGAGCT TGACCGGAGG 
    TCTGTCGCTT CGTCATTGTA CTCTCATTTC TCGGTGTCGA AGAGGAGGAC 
    AGAGTTTTTC AGGAAGAAGG CAGAGAGTTT CTGTCGTCCT GTGAGAGGCG 
    CCGCTCCTTT CGTTGTATGC AGTTCTTGTA ACCAGCTGCT GCAGCTGCCT 
    CCTGGGAAAT GCACAGCTCG GAAGCAGATT CAAGTTCGGT GTGGTTCGTG 
    CTCGGAGATC GTTAGTTTCA AGCTTAAGGA AGTGAAAATT CATCCTTTGG 
    TTGCGCCGAC ATCTTTCCCT GCATCAAAAA CAGTGGGGAG TTCCAGTCGT 
    CAGGTTAACA AAAGTTTTGG GTGGTACCAA CATCAGGATG AAGGAAATTC 
    TAGTTTCCAT AAGCTGCAAG CACAAGAGAG ATGGCAGCAG AACAAGGATC 
    TTGCAGACAA TATTTCTGTG TCTTCTACTT CTAGTTATGA CAGAATAGAC 
    AAAGAGTGTG GATCAAACAG GAGCAGTCAG TTACTATCAG TATCTGTTAG 
    AAGGTCCAGA CTTGCAAATA TCCCAAAGGA TATACTATGT CAAGGAGATG 
    CATACAGTCA AGTAGAAACT TCAGCATTTA ATACAGGCAA TCTACAGGCC 
    CCAGTTATAG AGGACAAATG TGTCGATCCA TTTTCCAGTC GTCTAAAGGA 
    TTGTAGTGGT GGAGATCGCA CAAGCAAGGA ATGTAGCCTA AATATCATGG 
    CAGATTCTGT TGATGCTAAT GTTAGGGATG AAAGATCGGA CGTGACATAT 
    GAGCAGAACA GCAAAGATCA TAAAGAAGGA TTTGGAGAAG AAACTGTCAG 
    CAGTAGACAT GAGCAAAAGC TCAAAGAAAG TACAAGTGGC TTTTGTGATG 
    ATGGAAGCAT GGGTAACATA GACAAGCTGA CGGCTGATAA TGATGATACC 
    AGCAGCCTTG AAGATGGAGA CGTGAGCAAA AAGTATGAAG AAAAAATCAA 
    ACAAGATGAC AACAACTTTC AATCAGAATT CATTACTGAG CGATATAGCA 
    AATGCAGCAA AGAAGATAAT AACAGTGTCA TTCAAGTTGA AACTATAGCT 
    ACGATATGCA AACAAGATGA CTTAGATGAT TGTTATAGTG AATTGCTCTC 
    CCCAAATTCT GAACATGCCA TAATGCCATC GAAGCTTGAG TCATCAGTTA 
    ATGAGCGCAC AAATTCTAGT TCTCGTGTTT CTTCTGAGGC TGAACTAGAC 
    GAAGTTCAGT CTGCAGCTAC TAAGAACGGG GATTCAAAGT TTTTTGCTGG 
    TTTTTTGAAG AAAGGTTTGA AGGACATTTC TTTGTTCAAT CAATCAGTGG 
    ACAGTGCTAA GGTTTCAATC AATGGCCATT CAATCTCCGA ACGTGTCCTA 
    CGGAAGGCCG AGAAGAAGTC TGGTCCAGTT GGCCCTGGTT CATATTGGTA 
    TGACTACCGC GCTGGATTTT GGGGTGTCAT GGGACATGAG TGTAGTGGCA 
    TCATCCCTCC ATTTATAAAG GAATTTAATT ATCCAATGCC GAAAAATTGT 
    GCCGGTGGGA ACACAGGAGT TATTGTCAAT GGTAGAGAAC TTCATCAGAA 
    AGACTTTGAA TTGCTTGCAG GAAGAGGTCT CCCACGGATA TCTGGAAAAT 
    CATATTCTGT TGAGATCAAT GGAAATGTGA TTGATGAAAC AACTGGCAAA 
    AAATTACGAA AGCTTGGAAA GCTTGCTCCT ACAGTTGAGA AGTTAAAACG 
    TGGATTTGGC ATGCACGTCC CTGAAGAGAA AAGTTAGCTC TCTGGCTCTG 
    ATGATGTTCC CTTGCTTTGC AAAAACTCAT TTCCACGTAA AAGCTGTCAA 
    GGGAGTTAAA TTGGATTGTG GCATGGAAGA AGCCTTTAGA TTGTACTTCT 
    TGAAGCTTGA GTGTGCAGCA ACAGTAATAC ACGAGTACCT AAGACGACCT 
    GTTTTTTATA TATATTTACC ACTTACTCAT TCAAAGTTGA CAAATTGTCG 
    TACAAATTCC ATTACTTCAT TTGAAGCATT CTTTAGGTAT ATATGACCTA 
    AGCATGCGAA CAGCTCTAAG TTCCTCATGT GTCTGGGTAT GTTGTTTCCT 
    GTCCCCTGCA TATGTTGTTG ATACAGAGCA ATAGAGTATA GACAATATTC 
    TGGGTGTGTA TCGTTGTGGG CTTGTAATAT GTCTGCTATA CCAGTGCCTT 
    TTTACATTAT ATTACACATG TATGTAAAGT TGTAAATATT TAATCTTAAC 
    CACCTTTTGC TAGGTGGCAG ATGTGAATGT TTGATGATTT GGGCTTGAGG 
    TTTCATTC

    Gene models with high sequence identity

    1. AT3G61670.1 [+] show detail - Protein of unknown function (DUF3133)
      E-value: 3e-51; Score: 201.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G61670.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF3133)
    Computational Description
    Protein of unknown function (DUF3133); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT2G46380.1); Has 340 Blast hits to 282 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 17; Plants - 302; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR