K36719

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36719

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36719

Determination of introduced cDNA(s)

  • J023127C09 - Rice Full-length cDNAs - Original: J023127C09

    full reading [+] show sequence

    Nucleotide sequence: J023127C09 - full reading
    GTGCTCCTCG CTGCTTCTGC GTCTCCTCCA CGAGACCACG ACCGACGCCC 
    CCACATGGGT CTCATGGTGG TGTGAGCTGA GCTGCTTGCT GCTCAAGTGG
    TGAGAAGGTA GAGAGAGAGA GAGAGAGAGA GAGCTGAGCT GCAAGAAAGG
    CTCACCCATC GAGGACACCA AAACAAGTCA AGAACGAACG ACTCGTGATC
    CGTCCATGGG TTGCTCTCCT GTCAGGCGCA TGAGATTCTG AGGCGGAGGA
    AGAGGAGAGA AAGGAGGAAG AAGAGCAAGA TAGCGGCGGC GGCGATGAGC
    TGGAGGAAAG GAGGAGGAGG GGATGGAGGG GTGTCGAGGA GATGGGCCGT
    GCTGCTCTGC CTCGGGAGCT TCTGCCTCGG CCTGCTCTTC ACCAACAGAA
    TGTGGACACT GCCTGAGGCA AACGAGATTG CTCGACCAAA CGGAAATGGA
    GACGAAGGCA ACACGCTAGT TGCCGCGGAG TGTGGTCCTA AAAAGGTCCA
    ACATCCCGAT TACAAAGATA TATTGCGGGT TCAAGATACT CATCATGGTG
    TACAGTACGT ACAGGCCTTG TCTTTCTTGA GAATATTTTT GTTTGCTTGT
    TGATTTTTTT TTTTTAGTTC TGATCGGTAT TTTTGGATGC TTTGAATGTA
    GAACACTAGA TAAGACAATA GCAAGCTTAG AGACAGAACT CTCAGCTGCA
    AGATCTCTAC AAGAGTCCTT GCTCAATGGT TCCCCAGTTG CAGAAGAGTT
    CAAACTTTCC GAGTCAATCG GGAGGCGGAA GTACCTTATG GTGATCGGCA
    TCAATACTGC ATTTAGCAGT CGGAAGAGAA GAGATTCCAT ACGTTACACC
    TGGATGCCTC AAGGTTGTTG ACATTAAAAT CTGGAATATG TGTTTCATTA
    AGAAAAATCT GTTTATTCCA TCGCAAAAAA GTGAAGGACA GTACTTTTGT
    TCCCCTGCTG AAAAGAAAAG GAACAGTACT TCTATAGTTT TATTGGCATG
    ACTCGATAAA CTAACAGACA AAAAACAGGT GAAAAAAGGA AGAAGCTTGA
    GAAGAGAAGG GGATCATCAT TCGTTTCGTC ATTGGCCACA GTGCTATATC
    AGGTGGAATT GTTGATAGAG CAATTGAAGC AGAGGACAGA AAACATGGTG
    ACTTCATGAG AATTGTAAGA CAAGCACTTG CTTAATTGCT TATTGGTTTT
    TCATGGATCG TATTTATCAA GTGACTGTTT CTCCTAGAAT CACTGGGAAT
    GCTATTTCGC CCCCTTATTT ATTGTGGTCT AACTTTATTC AGGATCATGT
    TGAAGGATAC CTTGCACTAT CTGGCAAAAC CAAGACATAC TTTGCTACGG
    CTGTTTCATT GTGGGATGCA GACTTTTATG TGAAGGTTGA TGATGACGTG
    CATGTAAACA TAGGTAAATC TCCATATCTT TTATGCCCTT CTATTGTTCT
    TTTTTGAACA TTTTATCGAT CTTAAGATGA GAGGAAAGTG ATCATATCTG
    TGTGCCGCCA TCATGTCTGT ATTTGAAGCT TCTCTTTGAC TCATTGATGG
    TCATCTTAAG TGTCCATTTT GTATGTGTAG AAACATTAAC CAGGGTTTCA
    AATATTTCGC AAGATAACAC GCAGCTAGTC TCATCAATGC ATATTTGATT
    CATTGCATGT AGAAAGGGCA TCACTGCTAT AGACAATTGA TTCTTTATGA
    CATTGGTGTT TTGCTTTTGC AGCAACACTT GGACAGATTT TATCTAATCA
    TGCATTGAAG CCCAGAGTAT ATATTGGATG CATGAAATCT GGTCCTGTCC
    TAACTGAGAA GTAAGTGCAT CACATGGTTT TAACTGTTCT TTCTGACAAT
    GTCTCCTTTC CTTTTCTCAT GCCCTCAAAA TTTGCTAAGT TTTGTTAACC
    CTTGTCTCCA GGGGTGTGAG ATACTATGAA CCTGAGCATT GGAAATTTGG
    CGAACCAGGA AACAAATGTT TTCGGCATGC TACTGGTCAA TTGTATGCTA
    TTTCAAAAGA TCTAGCAACC TACATATCTA TAAACAGGTG AGATAACACC
    TGTTTTCATA TTTACCTGTG TGCACATGCA CGCCTTGTTC TCATTGTTGC
    ACAAACTAAT GCTGATTCCT CTAATCCAAT TGCTAGACAT GTCCTCCACA
    AGTATATAAA TGAGGATGTT TCATTAGGAA GTTGGTTTAT TGGATTAGAT
    GTCGAGCATA TCGACGACCG GAGACTTTGT TGTGGTACTC CGCCTGGTAA
    GCTCCCTACC TCCTATCTTG CATTTATTAT CTGAAGCTTC TCTTCATACC
    TAGCAATACC AACCGGACGA ACAACGTAAA CATTTGAACC GAGTCACATT
    TTCGTGTCGT CGATCACAGA TTGCGAGTGG AAAGCTCAGG CGGGGAACAC
    CTGCGCCGCG TCATTCGACT GGAGATGCAG CGGCATATGC AACTCGGAGG
    GGAGGATCTG GGAGGTGCAC AATAAGTGCG CCGAAGGGGA GAAGGCGCTT
    TGGAACGCAA CCTTCTAGCG TGACCGAAAC AACCGGTC

    Gene models with high sequence identity

    1. AT1G05170.2 [+] show detail - Galactosyltransferase family protein
      E-value: 1e-60; Score: 50.40

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPanther ELICITOR RESPONSE PROTEIN-RELATED 2.7e-23
    HMMPanther Glycosyl transferase, family 31 2.7e-23
    HMMPanther ELICITOR RESPONSE PROTEIN-RELATED 5.2e-18
    HMMPanther Glycosyl transferase, family 31 5.2e-18
    HMMPanther ELICITOR RESPONSE PROTEIN-RELATED 5.9e-25
    HMMPanther Glycosyl transferase, family 31 5.9e-25
    HMMPanther ELICITOR RESPONSE PROTEIN-RELATED 4.3e-24
    HMMPanther Glycosyl transferase, family 31 4.3e-24
    HMMPfam Glycosyl transferase, family 31 2.8e-09

    See the detailed result >

    AT1G05170.2

    Model type
    Protein coding
    Short Description
    Galactosyltransferase family protein
    Computational Description
    Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR