K35834

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35834

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35834

Determination of introduced cDNA(s)

J033005A04 - Rice Full-length cDNAs - Original: J033005A04

full reading [+] show sequence

GAATAAACCC ATCCTGTATT AGCAGATTGG TAATAGCAGA AGGAGGTGGC 
CCAATCTTAA ATTCTTAATT CAAGTGTCTG GGCCTATTTG GGCAGCGAGA 
TATGAGTATC AAAAGCAGCG ACGGGAAGAG CCCCATAGTG GTTGGCCCTT 
GGGGTGGCAC AGGAGGATAC CCTTGGGATG ATGGTGTATA CTCAACGGTA 
CGCCAGGTCA TCATCACCCA TGGTGCAGCT ATTGACTCCA TAAGGATTGA 
ATATGATCTG AAAGGAAGTT CAGTCTGGTC AGAGACACAT GGGAGCACCG 
ATGGAGGTTC TGAAACAGAT AAGGTGAAGC TAGATTTCCC TGACGAAATC 
CTTGTGTCTG TAAGTGGCTA TTACGGGTCA GTCTGTGGAA CTCCAGTTAT 
CATAAGATCA TTGACATTTC AAAGCAATCG TTCCATATAC GGGCCTTTCG 
GTACTGAAGA TGGGACACCT TTCTCACTCC CAGTAAGCAG TGGTAAAATT 
ATTGGTTTTC ATGGAAGGTC AGGGTCGTAT CTCAACTCAA TAGGCTTTTA 
TCTGAAGCAA GTGAATGTTT CAGATCGATC AAATTCTCCA GTCTTGCCTC 
AGAGTAGAAG TATTACAAGT GCATATAACA AAAATGGTTA TAGCTTTCCT 
GAGGGTGCTT CAGGATATGA CATGGTCCTT GCAGTGAGAG ATAGGGGTGA 
CAGCTATGCT GTTTATACTA GCAATTACCC TAATCAGCAG TATACAAATC 
CATCCCCAGA TTACAATGAT GGAATCCGCT GGAATAAGGT GCCACAAACT 
AGTCCATCAC TGCAGATGGT ATCTTTTCCT AGTGGTTACG GAGATAGAGG 
AGGTGCAGCT CTGAGTAGCC ACGAGACCTA TGGTCCTTGG GGTGGAAGTG 
GTGGCACCAT GTTTGATGAT GGCATGTACA CCGGTGTGTG GCAGATCAAT 
TTGACTCGTG CAGTGGGAAT TACTTCTATA AAGGTACTTT ATGATCGAAA 
TGGCCAAGCA GTGTGGGGAA ACAAGCATGG ATTCAGTGGA GCTGTTTCAC 
CAGACAAGAT AGTATTTGAT TTTCCCTCGG AGGTCTTGAC TCATATAACC 
GGCTACTATG GCACGACAAT GATCATGAGT CCAACAGTGG TCAGATCACT 
CACATTCCAC ACAAACAAGC GGAGATACGG ACCATATGGG GATGAGTGTG 
GCACGTATTT CTCCACCAGT TTTTCTGATG GGAGGATAGT AGGATTCCAT 
GGTAGGGAGG GATGGTACAT TGATGGCATC GGGGTCCATG TTCAGGAAGG 
TAACTTGGTT GCACCGCGAG TTAGTAGTAG ATCAACGATT GAGATGAACC 
CCTCTTTGCG CTACGACATG CTTGCACAAT CAAGGAGTGA AACATACAAT 
GAGGTTCCTT ATAGCATGGT GAAAGAACCA GTTCCAATGG GGCCAGGGCC 
ATGGGGTGGC GAAGGAGGCC GGCCATGGGA TGATGGTGTC TACACTGGTG 
TGAAGCAAGT CTATGTGATG AGAGGCACCT TTATCGGCTC GATACAGATC 
GAGTACGACA GGGGTGACCA ATCCGTCTGG TCTGCAAGGC ATGGAACCAG 
TGGCCACATA ACCCATAGGA TTAAACTGGA CTACCCACAC GAGGTCCTGA 
CATGCGTATA CGGCTACTAC AACACCAACA GGGAGGAAGG GCCCAGGGTT 
CTGAGGTCGA TCACCTTCAT CAGCAACCGA GGGAAGTACG GGCCATTCGG 
AGAGGAGTTC GGGGCATACT TCTCGTCGGC GAAGACGGAA GGGAAGGTTG 
TGGGCTTCCA TGGCCGGAGC GGGCAACACC TGGACGCCAT TGGGGTGCAT 
ATGCAGCACT GGATGGGAGA CAGGAGGCCT GCTCCCAAGT ACGTGCTATC 
AAAGTACCTC TTCTGATTGA GCTATGGATG AAAACTTGAA TTCCTTTGAA 
ACAAAAAGTG AATACTTGAA TTACATGTAG TTTAGCCAAT AGTCATATAG 
ATAACAGATG GGCTGGTTTC GATTTGAGCT TTGGAGGCTG TAACATTTTG 
GGATATGGAA CAGTTTAAGC CTGCGGATGA GTCCGTTCCT TGTACTCAGG 
CAGGCAGGCA TATACTTAAT GCATGACGAT TTATGAGTAA ATTCAAATGA 
AATTC

Gene models with high sequence identity

AT1G19715.3 [+] show detail - Mannose-binding lectin superfamily protein
E-value: 3e-145; Score: 513.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Mannose-binding lectin	7.6e-45
superfamily	Mannose-binding lectin	2.6e-42
superfamily	Mannose-binding lectin	7.2e-42
Gene3D	Mannose-binding lectin	8.3e-41
Gene3D	Mannose-binding lectin	6.3e-37
Gene3D	Mannose-binding lectin	4.4e-36
HMMPanther	JASMONATE INDUCIBLE PROTEIN-RELATED	0.00014
HMMPanther	KELCH REPEAT DOMAIN	0.00014
HMMPfam	Mannose-binding lectin	1.3e-33
HMMPfam	Mannose-binding lectin	1.1e-31
HMMPfam	Mannose-binding lectin	6.9e-31

See the detailed result >

AT1G19715.3

Model type: Protein coding
Short Description: Mannose-binding lectin superfamily protein
Computational Description: Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1).
Link: InterPro Scan - TAIR