K33830

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33830

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33830

Determination of introduced cDNA(s)

  • J013170B19 - Rice Full-length cDNAs - Original: J013170B19

    full reading [+] show sequence

    Nucleotide sequence: J013170B19 - full reading 
    GGCTTTGTTC ACACCGCGCG TGCCAGCGAG AGCCATTCTC GCCGGAGCGA 
    CCTCGCCGGC GACGCCGTCG CCGCCACCCC ACCTCCGTGC GGTATGCGTT 
    CTTCCTTCCC GCAGCTTCCA GCAGCGCGCT TCTCAACCCT CTCGCAGCGT 
    TTGCTCGATC CGTGACGCTG ACGCCTGCAT CCACTGAAGG TAGGGTAGGT 
    AGTGGCGGTT GCCGAGATGG CCGGGATGGT CGCCGCCGCG GCGCCGCCGG 
    CGTCTCTTTG CCGTCCGATT GCTGTCCCCC GAGCTCCTAT GCGCCGCCGC 
    CGGCTCACTC CCCGCGTGAA GACGACGCCC TCCCTTCGCT GCGAAGATTC 
    CCCGAAGATC GCTCTACTCC AGGTACAAGC CATGCGATCT TCAGAAGAGA 
    GTAGTTCTGA TGAGGACGAT GAGATCCTTT CTGAGCTCAA AGAGAAGTGG 
    GATGCTATTG AGAACAAGTC CTCTGTTCTC TTTTACGGAG GCGGAGCAAT 
    CATCGCTGTC TGGCTATCCT CGATTGTTGT CAAAGCTGTC GATTCAGTTC 
    CAGTGCTTCC GAACATACTG GAGCTAGTTG GGCTTGGCTA CTCGGGATGG 
    TTTGTGTACC GCTACCTGCT CTTCAAGGAA AACCGGGAAG AACTGGCCAA 
    TGGCTTTGAT GCTCTAAAGA AAAGGATCAC TGGAAATGAG GAATAGCTGT 
    GTATCCTGTT TCTCTGCTTG AACGTTGTCA TTAGAGCCTT TTGTTTTTTC 
    TCATGTAAAT GCTGGAAGCG TTATTGATGT TTATGGCCTC CCACATCTTC 
    TGTACTGTCT GCAGCTCAGC GGGGTTTGCA GTATCATCTG ACTTCTGAAC 
    AGATCTCCAC ATTTATGGCT GCGCTAAAAT GCTTGTGATT CTTCTGATAT 
    GGAGGTCGGC TGGTCCTGTT TCTTGGCTGG CTTCCTTTCC CCAATGATTC 
    AGCTGTATGT TACTACTGCT AAGTTTAAGC CAGAACTGAT AAGTTTAAGC 
    TGTAGTACAA GCAATTATTT GAAATAAATT CAGTAGTCCG

    Gene models with high sequence identity

    1. AT4G01150.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 7e-30; Score: 128.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G01150.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR