K33443

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33443

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33443

Determination of introduced cDNA(s)

  • J013031L04 - Rice Full-length cDNAs - Original: J013031L04

    full reading [+] show sequence

    Nucleotide sequence: J013031L04 - full reading 
    TTGGGTGAGA TCGAGCTGAA AAAAAAAAGA GAGGCCACGA AGAGAGCTCA 
    GCTGCTGCCT CTAGCTTACT TGGTGATAAG GAGGAGGAGG AGGAGGAGGG 
    CACCGACATG GCCGCAGCCA CGGCGTACAC CGTGGCGCTC CTCGGCGCCA 
    CCGGCGCGCG CGTCCCCGCC GCTCCACGCT CCGCCGCGCT TCTGCCGCGC 
    CGCGGCGGCG TGCTCCAACC GCTGCGCCTC CAGGACGCGC CGCGACTGTC 
    CCTGCTCCGC GTCAGGGCCG CCTCCGACGA CACCTCCACC TCGGCCAGCG 
    GCGACGAGCT CGTCGCCGAC CTCAAGGCAA AGTGGGAGGC GATCGAGGAC 
    AAGCCGACGT TCCTCCTCTA CAGCGGCGGC GCCGTCGTCG CCCTCTGGCT 
    CACCACCGTC GTCGTCGGCG CCATCAACTC CGTGCCGCTG CTCCCCAAGA 
    TCCTGGAGCT CGTCGGCCTC GGCTACACCG GCTGGTTCGT CTACCGCTAC 
    CTCCTCTTCA AGGAGAGCAG GAAAGAGTTG GCGACCGACA TCGAGACCTT 
    GAAGAAGAAG ATCGCTGGAA CGGAGTAATT AAGCAGCTGC ATTTGTCCGG 
    GGAAGTTTTG GGGGGTGACT CTCTAGAGTG CTTGCTGCTG CTTCCTCTGT 
    GTGATGTTTG TATATCTCTA CGAGAATATG TTCTGCTCCC ATGTGCAGTA 
    ACAGCGTAGT GCAAAAACTG TATCAAACCT ACTATCAGTT GTTTCTTCGA 
    AATTCAAAAC AATTTCTTCG CTTTCTTGTT GCGTGGAAGT GTTCATATAA 
    TCTGGCGTAT GACAATGAGA ATATATATCT CGGAGAATGG TTGATCGACT 
    CATT

    Gene models with high sequence identity

    1. AT4G01150.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-28; Score: 122.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G01150.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR