K33315

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33315

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33315

Determination of introduced cDNA(s)

  • J013157I01 - Rice Full-length cDNAs - Original: J013157I01

    full reading [+] show sequence

    Nucleotide sequence: J013157I01 - full reading 
    TTTCCGATCT TCTTCTTCTT CCCCCAAAAA TCTAATTAAA ATCCCCTCCC 
    CCAAAAACCC CTCTCACCCG AATTTCCTCA TGGACTCGGT GCCGGCCGCC 
    GGAGTCGGCG TCGGCGGCGG CGGCGCGGGC GCGGGCTACC CGTAGTCCAC 
    GGAGTCATCC CCACGCAGCC GGGGCGGCGA CTCGTGGGAC GAGCCCTTCC 
    CTTCCTCCGC CGCGGCGGCG GCCGCGGCTG CCGGGGGAGG GAGGCTCCGC 
    CTCATGTGCA GCTTCGGCGG GCGGATCGTG CCGCGCCCCA CGGACAAGTC 
    GCTGTGCTAC CTCGGCGGGG AGACCCGGAT CGTGGCCGTC GAGCGGAACG 
    CCTCGCTGGC CGACGTCCAC GCGCGGCTCT CCCGCTCGCT CCTCGGCGGC 
    CAGCCGTTTA CTCTCAAGTA CCAGCTCCCC AACGAGGACC TCGACTCGCT 
    CATCTCGGTC TCCACCGACG AGGACCTCGA TAACCTCGTC GACGAGTACG 
    ACCGCATCGC CGCCACCTCC TCCGGCGGCG GCTCCTCCCG CACGTCGCGG 
    ATCCGCCTCT TCCTCTTCCC GGCCAAGCCC GAGTCATCCT CCTCCCTCGG 
    CTCCCTCCTC GACGACTCCT CCAAGTCCGA GTCATGGTTC GTCGACGCCC 
    TCAACAGCGC CATCTCCGGC TCCCTCGACG GCATCCCGCG CGGGATCTCC 
    ACCGACTCCG CCTCAGTCAA CTGCCTCCTC GGCCTCGAGG ACGACTCCTC 
    CACGCACTCC CGCGGCGGCC CGCCTAACTC TTCTCCCGCC GAGGAACAGC 
    GCGCCAACCA GCAGAAGCTC GCCGCGGCCG CGGCCGTTGC TGCGGCGAGG 
    CACCCGCACG ACGTGCAGTC CGTGCCGGAC TCGCCGATGA TTGACAAGAA 
    CTCCTCGTTC GGATCAACGT CCTCTGCGCC ATCGCTGTCG AATCTACCGC 
    CGATACGGGT GCGGCCCGAG GATCGCCCGC CGGATAGCCG ACTCGCCCCG 
    CAGGTTCCCG TTGAGGATCA CTTCGCCCAG ATGGGGATCT CCGATCAGCC 
    GGTGCAGCCT GTAATTGGGG GATACATGCA GCCGCCGCCA CAGGTGCCGA 
    TCCCCAACAT GGCTGTCCCC AGCATCTCCC CCTCGGATGC GTCCAGCCGA 
    GTGTTCTCCG ACGATGACAA GTCAGATCAC GGCGGCGGCG GAGGTCGGAA 
    GCCGCAGCCA CCCAAGCCGG AGGTTCCACC TGTCGCTGAC CCCACCAACA 
    GAGCCATGTA CTACAACGAT AGATCGCCTC CTGCTGAATT GAAGCGTGAC 
    ATGCCGGTTG GAACTGATGC TGCCAGCTAT CGTGTGCCTG TGCCAGCCCA 
    AGATGCTGCT GCCGCCGCCG CCGCTGCGGC TGCTGCTGCC CAGCAACCCC 
    CAGCTGGGTA TGTGTATGCA CAGATGCATG CGCCGCCACC GCAGCAGCAA 
    CCCCCACCAC CACAGCAGCA ACAGCCAGTC CCACAGCAAT ATGTCACTGC 
    ACAAAATCAG CATTTCATTC ACAATCCAGC TACTGGCACA TTCATCCCAA 
    TCCAATCCTA TTACCACCAT CCGGTCCCTC AGCAAGCACC ACAGCCGCCC 
    ATGCCGCAGC CTGTGCCACA GCCACAACAA TCACACGCTT TCGACCCAAA 
    TACTGGCATG TATTACATTC CCATGCGCAC GAATGCGCCT CAGGCATATA 
    GCATGCCTCC TGGTGCCGCT GCTGTGCCGC CTCCCACCCT TGTTGACACT 
    ACACCAAAAC CAACCGTGCC AATTCCTCAG ATGGCCGTGA AGCAGCCTGA 
    ACTGCAGCAA CCTGGTTTGT ACCGAACTAC CGCAGCACCT ACCCCTGTAC 
    CAGCGTCTAA TGCTCCTGCG TATGCTGGGA TGGGCTACCA CCATGTTATT 
    CAAACACACC ATCATCCAGC GCCACAGCCT GCAGCGACTG TGGCAGGCAA 
    TTTTGGATAT GACTATGGTG ATCCCACGCG AGCACAGGTC TTCTACTCGC 
    AGGCAGCGGC ACCACCAACA TTGCCACCTC AGTATCAGCC CATGGGCTCG 
    CCCGATGCTG GCCAGGCTGA CCTGAAACAG GCCCGGGCTT CATAGCTCAA 
    GGATTTGTGA ACTCTGGTAT GTTGAGAATC CTAGAAGTGT AGTTATCCTG 
    CCGTTAATTA TCACTATTGT TATTACATGT TACATGAGTC AGTTGGCAAC 
    CAGTGGATGG ATGATGGCAT TAGGCAGCTG TGCATTTGGG ATCAAAATAA 
    GATGAAAATG GGATGGTAGT TCTTGTGTTG GGTGAAACTC AAGAGGGTGT 
    TTGTGATTGG TTCTGGAGAT GCCAATCGCC AATGCTGGAG CAAGTGGCGG 
    GGAGTGGCTT CCAATTCCAA TTGCCGTCTT CTTATTTTTT AAAAAAATAA 
    ATATATAGTG TCTAAAGAAC TCGGTACAAA TTCTGAATCA AGAACTCATC 
    ATTTGTGTAG CCCTTTGTAT ATTTGAACCT GGAAGTTATT GAGGTTGAAA 
    TGTC

    Gene models with high sequence identity

    1. AT2G01190.1 [+] show detail - Octicosapeptide/Phox/Bem1p family protein
      E-value: 3e-65; Score: 247.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Octicosapeptide/Phox/Bem1p 3.2e-15
    HMMSmart Octicosapeptide/Phox/Bem1p 3.2e-31

    See the detailed result >

    AT2G01190.1

    Model type
    Protein coding
    Short Description
    Octicosapeptide/Phox/Bem1p family protein
    Computational Description
    Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR