K31942

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31942

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31942

Determination of introduced cDNA(s)

  • J023108H08 - Rice Full-length cDNAs - Original: J023108H08

    full reading [+] show sequence

    Nucleotide sequence: J023108H08 - full reading 
    GGGATCCTGC ATGCGCACGC CGGGCGCTTC CCTCTCGGAT CGGCCAATCG 
    GACGCACAGA GCACTTGCAG AAGCAAGGTG GAAGCTGTGT TAAGATTGTT 
    TTCTAGGTCC GGTGAATTCT GAGAGAGATG AAGGTGCGGA GCTGTACTGT 
    GAGAGGAAGA AAAGAGTGAA GTGGCATCAG CTGTGGCCAT CAAGTGCCAA 
    GGATATGAAG GTTGTTCCAG TGCCGCGTGC AAGAACAGCT CCAAGAAGGC 
    ACATATGGAT ACCAGTGATT CTAATTCTTG TTGCCGTCAC CGTGCTATGG 
    ATTTACTTAT ACCCTCCACA GGATTATACC TATCCTGTTA GGGATTGGTA 
    TCCTGTTAGG GACTGGTTTC CTGCAGAACC TGCCCGGGAA CTGACCGATG 
    AGGAGACTGC CGCTCGAGTT GTCTTTAGAC AAATCCTCTC AACGCCTCCA 
    TTCCCATCCA GGAACCCCAA AATCGCTTTC ATGTTCTTGA CTCCTGGCAA 
    GTTGCCATTT GAGAAATTAT GGGAGTTATT TTTTAAGGGC CATGAAGGGA 
    GGTACACTAT ATATGTTCAT GCTTCACGTG AGAAACCCGA ACATGTCAGT 
    CCTGTATTTG TTGGCCGAGA CATACACAGT GATAAGGTAG GATGGGGCAT 
    GATTTCTATG GTTGATGCAG AGAGGAGGTT GCTGGCAAAG GCCCTAGAAG 
    ATACGGACAA CCAACTATTT GTTTTGCTTT CTGACAGTTG TGTTCCCCTA 
    CACAATTTTG ACTATGTGTA CGACTTCTTG ATGGGATCAA GACACAGTTT 
    TCTTGACTGC TTTGATGATC CTGGGCCACA TGGAGTATTT AGATACTCGA 
    AGCATATGTT GCCAGAAGTT CGAGAGATTG ATTTTAGAAA GGGCTCGCAG 
    TGGTTCGCAA TCAAGAGGCA ACATGCAATG GTGGTGGTTG CGGATAGTCT 
    GTATTACACA AAATTCAGGC GTTTCTGCAA GCCAGGAATG GAAGAGGGTC 
    GCAATTGTTA TGCAGATGAG CATTACTTGC CAACACTATT CCTTATGATG 
    GACCCTGCTG GAATTGCTAA TTGGTCTGTG ACTTATGTTG ATTGGTCTGA 
    GGGAAAGTGG CATCCCAGGT CTTTCCGAGC TAAGGATGTA ACTTATGAAC 
    TCCTCAAGAA TATGACATCG GTTGACATCA GCTACCACAT AACAAGTGAT 
    GAAAAGAAAG AGCTCTTGCA GAGGCCTTGC TTGTGGAATG GACTAAAGAG 
    ACCATGCTAC TTGTTTGCAA GGAAGTTCTA CCCAGAAACT TTGAACAATC 
    TCATGTACTT ATTCTCTAAC TACACCATTT TCTAAGCTCT AACGGGAAAA 
    TCCTCACATA TTGGAAGCAC TTGGTGCTTC AAAATTCTTT TGTACATCGC 
    GGGAGAAGCA AATTTATTTA CACTAATTGG GTATAGAAAT AGGGGAAGTA 
    TTGGATTCTA CTGCAGCAAT ATTAGGGTAT TGTGGCCATG GGTATAGTTT 
    AGGATTATAT TATTTAAATT TCTTAGTTTT TCAGGGTTCT TTGTCTTCCT 
    ACAAACGTTG TTCATTCTGG CAAATTTTGC CACTATCAGT TTTCTCTTAT 
    AGCCCAGTTA TAGAATTTTG CCACTTATCC ATGCACAAAA AATGTGTGTA 
    AATGGAATTC TATGTATTCT CTATTCATCC TGTATGCTTG TATTCTACAG 
    AGGGATAACA AAAAAGTTTT GCAAAGCAGA ATTC

    Gene models with high sequence identity

    1. AT4G31350.2 [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
      E-value: 2e-135; Score: 479.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G31350.2

    Model type
    Protein coding
    Short Description
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    Computational Description
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT2G19160.1); Has 585 Blast hits to 585 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 553; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR