K31151

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31151

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • low saturation (PATO:0000328)
    (Seed::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31151

Determination of introduced cDNA(s)

  • J013000H09 - Rice Full-length cDNAs - Original: J013000H09

    full reading [+] show sequence

    Nucleotide sequence: J013000H09 - full reading 
    GCTTCCGATC TTCTTCTTCT TCCCCCAAAA ATCTAATTAA AATCCCCTCC 
    CCCAAAAACC CCTCTCACCC GAATTTCCTC ATGGACTCGG TGCCGGCCGC 
    CGGAGTCGGC GTCGGCGGCG GCGGCGCGGG CGCGGGCTAC CCGGAGTCCA 
    CGGAGTCATC CCCACGCAGC CGGGGCGGCG ACTCGTGGGA CGAGCCCTTC 
    CCTTCCTCCG CCGCGGCGGC GGCCGCGGCT GCCGGGGGAG GGAGGCTCCG 
    CCTCATGTGC AGCTTCGGCG GGCGGATCGT GCCGCGCCCC ACGGACAAGT 
    CGCTGTGCTA CCTCGGCGGG GAGACCCGGA TCGTGGCCGT CGAGCGGAAC 
    GCCTCGCTGG CCGACGTCCA CGCGCGGCTC TCCCGCTCGC TCCTCGGCGG 
    CCAGCCGTTT ACTCTCAAGT ACCAGCTCCC CAACGAGGAC CTCGACTCGC 
    TCATCTCGGT CTCCACCGAC GAGGACCTCG ATAACCTCGT CGACGAGTAC 
    GACCGCATCG CCGCCACCTC CTCCGGCGGC GGCTCCTCCC GCACGTCGCG 
    GATCCGCCTC TTCCTCTTCC CGGCCAAGCC CGAGTCATCC TCCTCCCTCG 
    GCTCCCTCCT CGACGACTCC TCCAAGTCCG AGTCATGGTT CGTCGACGCC 
    CTCAACAGCG CCATCTCCGG CTCCCTCGAC GGCATCCCGC GCGGGATCTC 
    CACCGACTCC GCCTCAGTCA ACTGCCTCCT CGGCCTCGAG GACGACTCCT 
    CCACGCACTC CCGCGGCGGC CCGCCTAACT CTTCTCCCGC CGAGGAACAG 
    CGCGCCAACC AGCAGAAGCT CGCCGCGGCC GCGGCCGTTG CTGCGGCGAG 
    GCACCCGCAC GACGTGCAGT CCGTGCCGGA CTCGCCGATG ATTGACAAGA 
    ACTCCTCGTT CGGATCAACG TCCTCTGCGC CATCGCTGTC GAATCTACCG 
    CCGATACGGG TGCGGCCCGA GGATCGCCCG CCGGATAGCC GACTCGCCCC 
    GCAGGTTCCC GTTGAGGATC ACTTCGCCCA GATGGGGATC TCCGATCAGC 
    CGGTGCAGCC TGTAATTGGG GGATACATGC AGCCGCCGCC ACAGGTGCCG 
    ATCCCCAACA TGGCTGTCCC CAGCATCTCC CCCTCGGATG CGTCCAGCCG 
    AGTGTTCTCC GACGATGACA AGTCCGATCA CGGCGGCGGC GGAGGTCGGA 
    AGCCGCAGCC ACCCAAGCCG GAGGTTCCAC CTGTCGCTGA CCCCACCAAC 
    AGAGCCATGT ACTACAACGA TAGATCGCCT CCTGCTGAAT TGAAGCGTGA 
    CATGCCGGTT GGAACTGATG CTGCCAGCTA TCGTGTGCCT GTGCCAGCCC 
    AAGATGCTGC TGCCGCCGCC GCCGCTGCGG CTGCTGCTGC CCAGCAACCC 
    CCAGCTGGGT ATGTGTATGC ACAGATGCAT GCGCCGCCAC CGCAGCAGCA 
    ACCCCCACCA CCACAGCAGC AACAGCCAGT CCCACAGCAA TATGTCACTG 
    CACAAAATCA GCATTTCATT CACAATCCAG CTACTGGCAC ATTCATCCCA 
    ATCCAATCCT ATTACCACCA TCCGGTCCCT CAGCAAGCAC CACAGCCGCC 
    CATGCCGCAG CCTGTGCCAC AGCCACAACA ATCACACGCT TTCGACCCAA 
    ATACTGGCAT GTATTACATT CCCATGCGCA CGAATGCGCC TCAGGCATAT 
    AGCATGCCTC CTGGTGCCGC TGCTGTGCCG CCTCCCACCC TTGTTGACAC 
    TACACCAAAA CCAACCGTGC CAATTCCTCA GATGGCCGTG AAGCAGCCTG 
    AACTGCAGCA ACCTGGTTTG TACCGAACTA CCGCAGCACC TACCCCTGTA 
    CCAGCGTCTA ATGCTCCTGC GTATGCTGGG ATGGGCTACC ACCGTGTTAT 
    TCAAACACAC CATCATCCAG CGCCACAGCC TGCAGCGACT GTGGCAGGCA 
    ATTTTGGATA TGACTATGGT GATCCCACGC GAGCACAGGT CTTCTACTCG 
    CAGGCAGCGG CACCACCAAC ATTGCCACCT CAGTATCAGC CCATGGGCTC 
    GCCCGATGCT GGCCAGGCTG ACCTGAAACA GGCCCGGGCT TCATAGCTCA 
    AGGATTTGTG AACTCTGGTA TGTTGAGAAT CCTAGAAGTG TAGTTATCCT 
    GCCGTTAATT ATCACTATTG TTATTACATG TTACATGAGT CAGTTGGCAA 
    CCAGTGGATG GATGATGGCA TTAGGCAGCT GTGCATTTGG GATCAAAATA 
    AGATGAAAAT GGGATGGTAG TTCTTGTGTT GGGTGAAACT CAAGAGGGTG 
    TTTGTGATTG GTTCTGGAGA TGCCAATCGC CAATGCTGGA GCAAGTGGCG 
    GGGAGTGGCT TCCAATTCCA ATTGCCGTCT TCTTATTTTT TAAAAAAATA 
    AATATATAGT GTCTAAAGAA CTCGGTACAA ATTCTGAATC AAGAACTCAT 
    CATTTGTGTA GCCCTTTGTA TATTTGAACC TGGAAGTTAT TGAGGTTGAA 
    ATGTCAGATA AAAGTGTCAT TACTTTGCTT GTAGAAACTT CATTTGAGTT 
    AAATATCATA TATATACATC ATTCCTGCC

    Gene models with high sequence identity

    1. AT2G01190.1 [+] show detail - Octicosapeptide/Phox/Bem1p family protein
      E-value: 3e-66; Score: 250.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Octicosapeptide/Phox/Bem1p 3.2e-31
    HMMPfam Octicosapeptide/Phox/Bem1p 3.6e-15

    See the detailed result >

    AT2G01190.1

    Model type
    Protein coding
    Short Description
    Octicosapeptide/Phox/Bem1p family protein
    Computational Description
    Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR