K25004

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25004

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25004

Determination of introduced cDNA(s)

  • J013132B11 - Rice Full-length cDNAs - Original: J013132B11

    full reading [+] show sequence

    Nucleotide sequence: J013132B11 - full reading 
    GACACCGGCA CAGCCACACA AATCACAGCC TCCTTCAAAC CGGCAGCCGG 
    CGCCGGCTGC TGATCCTCTC CATCGCCGCC GTGGCCGTGC TGCCGGCGTG 
    CCTCCAAATG ACTCCGCCCG GCAGTATCAG CACCACCTCG TCGAACCTTC 
    GGGCCCAGCA AAAACCCTCA ATTCCCAAGA AACCGTGTGC TTTCGGAGCG 
    CCACCGAGAC ACCTGCATCG CCCGTGCAAG AAGAACGCTG CCGTCTCGGT 
    GGCGTGCACC GGGCAAGGCG AACAACGATC CAGCCCTGCC ATCGCGGCGC 
    CGCAGGAGGC TCAGGCAGGC ACGTTTAGCG TCGAGTTCCG GACGCGGGAC 
    GGGTGCCGGC TGGGCATCTC CAGGTACCCG GACTTCGCGT ACAACGCCCA 
    GGGCGGCCGC GGCGTCGGCG TCGTCGCCAG CAGCGGCGAG GATAGTGGCA 
    CGGTTCTGGT CGAGTTCGAC GTGTCAAGCC TGTACATCCC GGCGATGTCC 
    GGCGCGACGA CCAAGTTCCT CGGGCTGCCG CTGCCGCCGT TCCTCAAGAT 
    CGACATCTTG CCCGAGGCTC TCCGCGGAAA CATCGATCCA ACAAGTGGTC 
    AGGTTGATCT GAAGTTCAGG TCGAGGTTCT GCTTCTCGGT TGGAAGCATC 
    TACCGAGCAC CGCCGCTGTT CGTCGACACA ACGCTGACCT CCGAGGAGTC 
    CAGTGGAGCC ATAAGACGAG GAACTGGAGA AAGGATGGAC GGCGAAGGGA 
    GATGCAAGCT GGTAGGGGTG GCCGTCGTCG ACCCCATTGA TGACGTCTTC 
    ATGAACACCT TCCTCAGCCT GCCGACCGAG TGCATCGCTT ACTTGAACGC 
    CACCATCTCC ATCACTGAAC CAAGCTGATC TTGCCTGTTT CAGTTGGTTG 
    TATAGATCTT AATGCGTGGT GAAACGCATG AATGTTGCAG GACGAAACTT 
    GCACGGAAAA GAACAGACTG TACTATTGTA GTATTGGCCA AGGGAATGCC 
    TCTTATTCAT

    Gene models with high sequence identity

    1. AT5G62140.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 1e-39; Score: 160.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G62140.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR