K23549

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow) low saturation (PATO:0000328) (Seed::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K23549

Determination of introduced cDNA(s)

J013147K07 - Rice Full-length cDNAs - Original: J013147K07

full reading [+] show sequence

TGAGCGATTT GTTTAGATCA AACGGGTTCG TAAAAAAAAA GTTTTATTCT 
CGGGTTCGTT GGGTTTTATC TATATAGGCG GCGAGCGAGA CCATCTCATT 
CAGTTTTATT CCGCGCGCCT CCTAAATCGC GCTTAATCCG GCGCATCCTG 
ATTCAGAGAG TGGTTTGGAT TCGTTGGATT CGAGGTGAAC GAACAGGGCG 
TGGAATTTTC GAGGACTCTC TCCTCTCGCA GAATCCCGCG CGCCTCCTGA 
TTCGGAGAGC GGTTTGGATT TGGATTCGAG GCGAGGAATT TTCGAGGACT 
TTGGCAGCGG CGGCGGGGGC TGGTGAGCTT CTGCTGCGGC TTGGAGTCTG 
CCCCCACCAT TGCGTGGGGA GGTGGAGGTG GAGGCGGTGG TGGCGGCGGG 
GGCGGCGGAG GACGATCCTT CCGCGGCTTC GGTGGCAGGT TTGATCCAAA 
TTGAGCGCCC TGAGGATTTG GGGCGTGTTT ATGGAGGATT AGATCGAGAA 
TTTTGGTTGT TTCTGTGAGA TGGCCGCCGA TTCCAGCATG GGATTCCATC 
AGGGGATCAC GGCCTCGATG TACAACCATC ACATGCTCTC CTTCCAATCT 
AACAGCGACT TGGGCGGTGG CGCCGGCGCT GCGGCCGGTA TGGTGATGGC 
CCCGAGGAGC ATGAACGGGA CTAGTAGCAG CGCTGGGCTG TTCGTCTCTC 
CGAACACCGG TGTGCTGGGC AACGCATCGG TGGCCGGCCC GTCGAGGAGC 
TCGTCGGGGG ATGCGTTCAG TAGCACGGTG GCGCCCAAGT ACAAGTTCGT 
CACTGGTTCG CCTTCAGATT GGAATGACCG TGAGCTGAAC ACACTGAAGG 
AAGGGCTTGT GAGATATGCT CGCGAACCGA ATATCATGAA GTACATAAAA 
ATAGCAGCTA TGCTACCCAA CAGGACTGTC AGGGATGTTG CATTGCGGTG 
TTGGTGGGCT ACAAGTAAAG ATAGAAGGAA GAAACCTGAT GGATTTTATA 
CAGGGAAAAA GATAAGAGAC ATGAAGCCAA TCCAGGACAA GATGGTTGCA 
TCTGCCTCCA TGGCTAATTT TCACCTGGCA CCTGCAAACA CTGTGACCCC 
TTTCTCAATA TCGATGCAAC ATACAAATCA GCAATGTCAG GTTCCTAAGG 
AAGAAGTTCC TGTCGTGGAT AGTGCAACAC AGCATCTCCT GGAAGAAAAC 
AATCATTTAC TCAACCAAAT CGCCACAAAT ATCGAAACAT TCAAGACGGG 
AGAGAACACG GATCTCTTTT TTCGGACAAA CAACAACTTC AAAAATATTT 
TAAGCAGAAT GAGCGAGACG CCTGGTATCA TGGGCCAGAT GCCCCAATTG 
CCAGTGCAAG TAAACGAAGA CCATCTGAGT TCACTTCTTC AGCTGGACAG 
AATGGTTCCT TCGTATGGCG TAACGCAAAC CTCTCATATG AAGCAAGAAC 
CGCGAAGCTA GTATAAACAT ACACGAAAAC AAGGACTTGA AAAGGAAAAA 
AAAGAGCAGA TGGCTGGAGC TCCGCCGCCC AAGTTTCGTG TACCATGAAG 
AAGGCTAAGT TGCCGCACCG AGTGAGCGAG CGCCAGGAAC AGTCCCGGCG 
TTTCTTTCTT CCAGCGAGAT TGTTTTCCAG TGATCTGATT GTCTGCCCGC 
CTGCCTACCT GCCCGAGTTG AAAGCTGTTG AAAGCACCGG AAATTGAGGC 
CTGCAGCTGC TTGCGGGGGT ATGCGCAACG GGCGAGCGAG TTGCTGTTGT 
TGTACCTGGT TGGGTATCCA GCGAAATGAA TACACCAGAC ACTTGATTCG 
GGAGTGAGTA ACACGCACAC AAGTGACTGT AAATATTTGG ATGGCTGGAG 
GTGTTCCCCT GTCCTGTTTT GTTCTCTCTG ATTGGTCGTC AATATATTTT 
TCGGAAGGGT ACCTTGTATG TTTTTCCACT TTGGAGAGTT AGGAGGGCAC 
CTTATGTATT ATTGCATAGT TGGAAGATCG TGTTGATAAA ACCAACAAAA 
AGATGGCTTT AGGTTTTG

Gene models with high sequence identity

AT1G10820.2 [+] show detail - Protein of unknown function (DUF3755)
E-value: 4e-30; Score: 130.00

InterPro Scan Digest

See the detailed result >

AT1G10820.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF3755)
Computational Description: Protein of unknown function (DUF3755); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G60670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR