K21324

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21324

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21324

Determination of introduced cDNA(s)

  • J023114L14 - Rice Full-length cDNAs - Original: J023114L14

    full reading [+] show sequence

    Nucleotide sequence: J023114L14 - full reading 
    GCTTCTTCTT CTTCGCGAAA ACGAAAGAAA AGGAGAGGCA AGAACAAGAA 
    CATCTCATCC CCAATTCCCC TCTCCCTAAA CCCTAATCCC GTCCGATTCG 
    CCCCCACCGG CCTCCAAGAT CGAAGCTCTT TCGGCATCTC CGGCTGGTCG 
    GAGAGGAGCT GCGCGTGGAG GGGGGGACTC TCGATTCCGG TGAGAAAACG 
    GCGCGACCCT TCTCCCGATT TCGCGATTTC GGTACCGTAC GGTTGCTCGT 
    CGGCGTCGGA TCCGGACGCG TGTGGGCGGC GAAAGGTTGG CCCTCGCGGT 
    TGATTTGGTG GTGGCGCGGT GTCTGAGATG GTTGCGTGAG CCATTCGGAG 
    AGGACAAGGT CGAGGAGGAG CAGCAGCTTC TGTTCGTGGC ATTTCTGTTG 
    CAAAGATTAG TGCTCCATTT CTCTGCAACC TCGCGCGGGG GGGAGGGGGG 
    GAGGGCGTTT GATCCATTTC TCCATTTCGG GTGGTTTCCA ATGGCTCGAA 
    TCCATGCCGA CCCGGTGCTG GAGGCCGACC AATTCGACCG GCTGCCGGAC 
    TCGCTTGTGC TGGTGATCCT CAACAATGTC GAGGATGTGC GCTCGCTCGG 
    CCGGTGCTCC GCCGTGTCGA AGCGGTTCTA CGGGCTCGTG CCCCTCGTCC 
    ATGATGTCTA TGTCAAGATC GACCGCGTCG TGACGGTCGA CGGCGAAGCT 
    GAGGACGCGC TTAACCTGTC CTCGCCGAAG CCGAGGAACA TCCTCTCGCA 
    TTTCCTCAAG ATGATGCTGT TCACGATCAT CAAGCCGTTC CACAGCATGC 
    GCGGCCCGAA CGGTGCTGGG CGGCCGCTGT TCCCGCAGCT CGCGCAGCAC 
    TCGCCGGCGC AGGTGCTCCG GAACTTCACG CACATCCGGA ATCTGCGGGT 
    GGAGCTGCCC TCGGGGGATG TGGGGACTGA GGAGGGAGTT CTCCTGAAAT 
    GGCGAGCGGA GTATGGGAGT ACGCTTCAGA ATTGTGTGAT TCTTGGGGGT 
    ACTCAGGTCG ACCGCAAGCC TGTTGGTGCA GAGCATGAGC TGTATTCGGA 
    GGACAATGGA AGCATGCCGG AATCCTTCTA TACCAATGGA GGGTTGAAAC 
    TCCGCGTCGT GTGGACAATC AGCTCTCTGA TTGCGGCATC AACGAGACAT 
    TATCTTCTTC GGTCAATTAT CAAGGATCAT CCCACTCTTA CAAGCTTGGT 
    ACTGACCGAT GCTGATGGCC AGGGCACATT GTCCATGGGA GCGGAGCAGC 
    TTAAGGAATT TAGGGAGAAC CAGTTGTCGG CCTCAGCATG TTCTAACAGG 
    ACTCAGGTTC CAGCATGCAA CATGAAGCTC AAATACGCTC CATATCTTGA 
    GCTTCCTGGC GGCATTGCGT TGCAAGGTGC AACGTTGGTC GCTATCAAGC 
    CCTCACCCGA GGGAAGCAAT GGCGGTCATA CTAGCCGCAA GGAAACGGAT 
    GCATTTGTCT CCGGAGCATT TGATGGACCA TTCAAGTTTG CTGTGAAGGC 
    GCTGATGAAG AGGCGAACTT ACCTTCTGGA GATGAATGGC TTCTAGATAT 
    CTTGTGCTGT TACTGGGTAC CTAGCTTGTT GGTCCAGGCA GTCATCTAGT 
    TACTTTTAAC TTCTGGTCTA TGTAATAGGT TGTGCTTTGC TCTCTGTTGT 
    ATTAGCTCTC TGTACAGTGG TGACATTCTG TTGGTTATAT GGAAATCATA 
    TCAAGTTAGT GTATCTTTCT CATTGCTCTC CCAATGCCAT GTCATGATTT 
    TATGCAACTA ACATCATGCA AGCTGATTGT TTGCTCTTTT TGTC

    Gene models with high sequence identity

    1. AT4G18380.2 [+] show detail - F-box family protein
      E-value: 3e-92; Score: 336.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G18380.2

    Model type
    Protein coding
    Short Description
    F-box family protein
    Computational Description
    F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G46170.1).
    Link
    InterPro Scan - TAIR