K20547

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20547

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20547

Determination of introduced cDNA(s)

  • J023045L10 - Rice Full-length cDNAs - Original: J023045L10

    full reading [+] show sequence

    Nucleotide sequence: J023045L10 - full reading 
    GACTCGGTGC GTGCGTGGGT CACTTGATCA CTGAAGCGCA CCAGCTAAGC 
    TCACCGTCTT CTTCCTCGCC GTCGCCGGAG GCCGGAGCAA TGCCGACGGT 
    GCGGCGGCGC CACCCGGACG TGCACGTGAA GGCGCTGGAG GGCATCGTGT 
    CGGCCAACAC CTTCTTCACG GTGGCCGTCT TCATCGGCAT CACCGGCACC 
    ATCACGCCGT CGTCCTCGAT CCCCCCCAAC TGCGTCGCCG GCGACGACAT 
    CGCCAGCAAC TTCTTCCTCT TCGAGATCCT CTCCTTCGGC TTCTACCTGC 
    TCTCCAGCCT GGTGGCGCAG GGCATGAAGC TGGCCGTCAC CCTCCTCGCC 
    ACCGACGACT TCTACGGCGA CGGCGAGCAG AAGCCCCCGC CGTCCGACGA 
    CTGCGAGGAG ATGCCCGCGT GGCGCGCCGC CGCGCCGCGG GAGCGCCGCC 
    GCGCCGTGCT CCGGTTCGCG CGGCCGATGA TGCTGCTCGC GGCGGGCTGC 
    TCCATCATGG GTACCTTCTT CCTGCTGCTG TCCATGGTGG ACGCCATCCA 
    GCTCAAGTTC GGCCTCGTCT CCTGCAACAT CCCCCTCGCC GTCGGCACCA 
    CCTTCGCGCT CGCCGTGCTC GTCGTCGCCG GCCTCGTCTT CTACGGCGCC 
    ACCGTCGCCT ACGCGCTCAC GCACTACCTG CCCTGATCAT CAATCACTCC 
    ACTCATCAGT TAAATTAATT AGTTACTCCT CCTTCCTCTT CTGCTGCTTA 
    ATTATTTTCA GTTTTGATTT TTGCATGAAA TGTACAGATG TCTTTGATTT 
    CTTGGTCAGA TGATGATACG AATGAGAGAG ACTTCATCAT ATTAAGCGTC 
    GATATGATTG GATTCTTGTT GTTTTCGTTT GTGAAAAGTG GTGCGAAAGA 
    GTAGGTTT

    Gene models with high sequence identity

    1. AT2G01580.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); ...
      E-value: 1e-20; Score: 97.40

     

    InterPro Scan Digest

    See the detailed result >

    AT2G01580.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR