K17029

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17029

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17029

Determination of introduced cDNA(s)

  • J023127C09 - Rice Full-length cDNAs - Original: J023127C09

    full reading [+] show sequence

    Nucleotide sequence: J023127C09 - full reading 
    GTGCTCCTCG CTGCTTCTGC GTCTCCTCCA CGAGACCACG ACCGACGCCC 
    CCACATGGGT CTCATGGTGG TGTGAGCTGA GCTGCTTGCT GCTCAAGTGG 
    TGAGAAGGTA GAGAGAGAGA GAGAGAGAGA GAGCTGAGCT GCAAGAAAGG 
    CTCACCCATC GAGGACACCA AAACAAGTCA AGAACGAACG ACTCGTGATC 
    CGTCCATGGG TTGCTCTCCT GTCAGGCGCA TGAGATTCTG AGGCGGAGGA 
    AGAGGAGAGA AAGGAGGAAG AAGAGCAAGA TAGCGGCGGC GGCGATGAGC 
    TGGAGGAAAG GAGGAGGAGG GGATGGAGGG GTGTCGAGGA GATGGGCCGT 
    GCTGCTCTGC CTCGGGAGCT TCTGCCTCGG CCTGCTCTTC ACCAACAGAA 
    TGTGGACACT GCCTGAGGCA AACGAGATTG CTCGACCAAA CGGAAATGGA 
    GACGAAGGCA ACACGCTAGT TGCCGCGGAG TGTGGTCCTA AAAAGGTCCA 
    ACATCCCGAT TACAAAGATA TATTGCGGGT TCAAGATACT CATCATGGTG 
    TACAGTACGT ACAGGCCTTG TCTTTCTTGA GAATATTTTT GTTTGCTTGT 
    TGATTTTTTT TTTTTAGTTC TGATCGGTAT TTTTGGATGC TTTGAATGTA 
    GAACACTAGA TAAGACAATA GCAAGCTTAG AGACAGAACT CTCAGCTGCA 
    AGATCTCTAC AAGAGTCCTT GCTCAATGGT TCCCCAGTTG CAGAAGAGTT 
    CAAACTTTCC GAGTCAATCG GGAGGCGGAA GTACCTTATG GTGATCGGCA 
    TCAATACTGC ATTTAGCAGT CGGAAGAGAA GAGATTCCAT ACGTTACACC 
    TGGATGCCTC AAGGTTGTTG ACATTAAAAT CTGGAATATG TGTTTCATTA 
    AGAAAAATCT GTTTATTCCA TCGCAAAAAA GTGAAGGACA GTACTTTTGT 
    TCCCCTGCTG AAAAGAAAAG GAACAGTACT TCTATAGTTT TATTGGCATG 
    ACTCGATAAA CTAACAGACA AAAAACAGGT GAAAAAAGGA AGAAGCTTGA 
    GAAGAGAAGG GGATCATCAT TCGTTTCGTC ATTGGCCACA GTGCTATATC 
    AGGTGGAATT GTTGATAGAG CAATTGAAGC AGAGGACAGA AAACATGGTG 
    ACTTCATGAG AATTGTAAGA CAAGCACTTG CTTAATTGCT TATTGGTTTT 
    TCATGGATCG TATTTATCAA GTGACTGTTT CTCCTAGAAT CACTGGGAAT 
    GCTATTTCGC CCCCTTATTT ATTGTGGTCT AACTTTATTC AGGATCATGT 
    TGAAGGATAC CTTGCACTAT CTGGCAAAAC CAAGACATAC TTTGCTACGG 
    CTGTTTCATT GTGGGATGCA GACTTTTATG TGAAGGTTGA TGATGACGTG 
    CATGTAAACA TAGGTAAATC TCCATATCTT TTATGCCCTT CTATTGTTCT 
    TTTTTGAACA TTTTATCGAT CTTAAGATGA GAGGAAAGTG ATCATATCTG 
    TGTGCCGCCA TCATGTCTGT ATTTGAAGCT TCTCTTTGAC TCATTGATGG 
    TCATCTTAAG TGTCCATTTT GTATGTGTAG AAACATTAAC CAGGGTTTCA 
    AATATTTCGC AAGATAACAC GCAGCTAGTC TCATCAATGC ATATTTGATT 
    CATTGCATGT AGAAAGGGCA TCACTGCTAT AGACAATTGA TTCTTTATGA 
    CATTGGTGTT TTGCTTTTGC AGCAACACTT GGACAGATTT TATCTAATCA 
    TGCATTGAAG CCCAGAGTAT ATATTGGATG CATGAAATCT GGTCCTGTCC 
    TAACTGAGAA GTAAGTGCAT CACATGGTTT TAACTGTTCT TTCTGACAAT 
    GTCTCCTTTC CTTTTCTCAT GCCCTCAAAA TTTGCTAAGT TTTGTTAACC 
    CTTGTCTCCA GGGGTGTGAG ATACTATGAA CCTGAGCATT GGAAATTTGG 
    CGAACCAGGA AACAAATGTT TTCGGCATGC TACTGGTCAA TTGTATGCTA 
    TTTCAAAAGA TCTAGCAACC TACATATCTA TAAACAGGTG AGATAACACC 
    TGTTTTCATA TTTACCTGTG TGCACATGCA CGCCTTGTTC TCATTGTTGC 
    ACAAACTAAT GCTGATTCCT CTAATCCAAT TGCTAGACAT GTCCTCCACA 
    AGTATATAAA TGAGGATGTT TCATTAGGAA GTTGGTTTAT TGGATTAGAT 
    GTCGAGCATA TCGACGACCG GAGACTTTGT TGTGGTACTC CGCCTGGTAA 
    GCTCCCTACC TCCTATCTTG CATTTATTAT CTGAAGCTTC TCTTCATACC 
    TAGCAATACC AACCGGACGA ACAACGTAAA CATTTGAACC GAGTCACATT 
    TTCGTGTCGT CGATCACAGA TTGCGAGTGG AAAGCTCAGG CGGGGAACAC 
    CTGCGCCGCG TCATTCGACT GGAGATGCAG CGGCATATGC AACTCGGAGG 
    GGAGGATCTG GGAGGTGCAC AATAAGTGCG CCGAAGGGGA GAAGGCGCTT 
    TGGAACGCAA CCTTCTAGCG TGACCGAAAC AACCGGTC

    Gene models with high sequence identity

    1. AT1G05170.2 [+] show detail - Galactosyltransferase family protein
      E-value: 1e-60; Score: 50.40

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPanther ELICITOR RESPONSE PROTEIN-RELATED 2.7e-23
    HMMPanther Glycosyl transferase, family 31 2.7e-23
    HMMPanther ELICITOR RESPONSE PROTEIN-RELATED 5.2e-18
    HMMPanther Glycosyl transferase, family 31 5.2e-18
    HMMPanther ELICITOR RESPONSE PROTEIN-RELATED 5.9e-25
    HMMPanther Glycosyl transferase, family 31 5.9e-25
    HMMPanther ELICITOR RESPONSE PROTEIN-RELATED 4.3e-24
    HMMPanther Glycosyl transferase, family 31 4.3e-24
    HMMPfam Glycosyl transferase, family 31 2.8e-09

    See the detailed result >

    AT1G05170.2

    Model type
    Protein coding
    Short Description
    Galactosyltransferase family protein
    Computational Description
    Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR