K14231

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14231

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14231

Determination of introduced cDNA(s)

  • J013000H16 - Rice Full-length cDNAs - Original: J013000H16

    full reading [+] show sequence

    Nucleotide sequence: J013000H16 - full reading 
    GGCACGCACG CACACCTCTC CCCTCCTCTC CTCCTCCCGC CGCCGCCGCC 
    GCCGCCGCCG CAAAAACCCG AGGCCGAGAG GAGGAGACGG GCGCGGGGGC 
    TGATCTCGTC GGCGAGGCGA GCGGGCGATC CGGTGCGGTG CGGGCCGGGT 
    GGACATGGCA TCGGAGGACG TGGTGGGGAA GAGCAGGGGG GACACCGCGG 
    TCACCACCAT CGTCAACCTG GCGGAGGAGG CCAAGCTCGC GCGGGAGGGG 
    GTCAAGGGGC CTGGTTACCA GGTGCTCTCC ATCTGCAAGT CTCTCTTCGC 
    CGGTGGCGTC GCCGGTGGAG TATCACGTAC TGCTGTTGCT CCGCTCGAAC 
    GAATGAAGAT TCTGCTTCAG GTCCAAAACC CTCACAGTAT CAAGTACAAC 
    GGTACAATTC AAGGTCTTAA GTACATATGG AGAACAGAGG GTCTCCGTGG 
    ACTTTTTAAG GGCAATGGTA CCAATTGTGC CAGAATTGTT CCAAATTCTG 
    CCGTGAAGTT TTTTAGCTAT GAGCAAGCAT CAAGTGGAAT TTTATGGCTT 
    TATCGGCAAC AAACAGGGAA TGAGGATGCT CAGCTTAGTC CACTATTGCG 
    CCTTGGAGCT GGTGCTTGTG CTGGTATCAT AGCCATGTCT GCTACTTACC 
    CGATGGATAT GGTTAGGGGT AGGATTACCG TGCAGACGGA AAAGTCTCCT 
    TATCAGTACC GTGGTATGTT TCATGCATTG GGTTCAGTAT ACCGTGAAGA 
    AGGCTTCCGT GCTCTATACA GAGGGTGGCT TCCATCTGTT ATCGGAGTGG 
    TTCCGTATGT TGGCCTCAAC TTTGCTGTGT ACGAGTCTCT GAAGGACTGG 
    CTGCTTCAGA CAAATCCATA TGATCTTGGC AAGGACAATG AGTTGCATGT 
    AGTTACAAGG CTTGGATGTG GAGCTGTGGC TGGAACCATA GGCCAGACTG 
    TTGCTTACCC TCTTGATGTC ATCAGGAGGA GAATGCAGAT GGTTGGTTGG 
    AATAATGCAG CATCTATTGT TACTGGAGAA GGCAAAGAGG CGCTCCAGTA 
    CAATGGTATG ATCGATGCAT TCAGGAAAAC TGTTCGCTAT GAAGGTGTTG 
    GTGCTTTGTA CAAGGGTCTT GTGCCCAATT CAGTGAAGGT GGTGCCTTCT 
    ATCGCTATTG CATTCGTGAC ATACGAGTTT GTGCAAAAAG TTCTAGGAGT 
    AGAGATGAGG ATATCAGACT GAAGAAATTG GAGTTAGTGC TGGTCATTAT 
    CAACTGCTAT TTTTGTAGGG TGGTGAGTTC TGTTTTTGTA GGAAGGGCAG 
    GTAGAAGGAT CATAGCACTG AGGCTCCCAT TCAGCATAAG GCCCTCTCAG 
    CCCATGTTGG TATATCCTAC TACTGTTTCC AGATCCTAAT TGTTGCTGGA 
    CCCGTGGGAA AAATTAATAA GTTGGCTGTA AAGCATGAAG CATTTGCCTA 
    ACTCATAAAG TCTATTCAGT CGTGATGGTG TATTGAGATT GAAAACTCAT 
    GCAGTATGCT GTGTGCTGCT AATAGTTGAT TTTCATCATT TTCTTCTCTT 
    TGTCTAAGAT TGTTTCTGCT GATAAATACT CTACTTAAAC CGAGTAATGT 
    TGGTGCGTTT TATACC

    Gene models with high sequence identity

    1. AT4G01100.1 [+] show detail - adenine nucleotide transporter 1
      E-value: 1e-162; Score: 570.00

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Mitochondrial carrier protein 3.6e-35
    FPrintScan Mitochondrial carrier protein 3.6e-35
    FPrintScan Mitochondrial carrier protein 3.6e-35
    FPrintScan Mitochondrial carrier protein 3.6e-35
    FPrintScan Mitochondrial carrier protein 3.6e-35
    FPrintScan Mitochondrial carrier protein 3.6e-35
    superfamily Mitochondrial substrate carrier 4.5e-91
    HMMPanther MITOCHONDRIAL CARRIER PROTEIN-RELATED 3.2e-133
    HMMPanther Mitochondrial substrate carrier 3.2e-133
    HMMPfam Mitochondrial substrate/solute carrier 9.2e-25
    HMMPfam Mitochondrial substrate/solute carrier 1.2e-27
    HMMPfam Mitochondrial substrate/solute carrier 7.7e-26
    ProfileScan Mitochondrial substrate/solute carrier 22.298
    ProfileScan Mitochondrial substrate/solute carrier 27.898
    ProfileScan Mitochondrial substrate/solute carrier 24.766

    See the detailed result >

    AT4G01100.1

    Model type
    Protein coding
    Short Description
    adenine nucleotide transporter 1
    Computational Description
    adenine nucleotide transporter 1 (ADNT1); FUNCTIONS IN: binding, ADP transmembrane transporter activity, ATP transmembrane transporter activity, AMP transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, plastid, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1); Has 27989 Blast hits to 14393 proteins in 468 species: Archae - 0; Bacteria - 2; Metazoa - 12077; Fungi - 8125; Plants - 4770; Viruses - 0; Other Eukaryotes - 3015 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR