K13347

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13347

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13347

Determination of introduced cDNA(s)

  • J023132D04 - Rice Full-length cDNAs - Original: J023132D04

    full reading [+] show sequence

    Nucleotide sequence: J023132D04 - full reading 
    GATCTGTCAT CATGGCCTCA TGGGTGCCAA TGGATGATGC AGATCTGGGA 
    CAGATGAGAC GACAATTGGG CAATAATGCC CAACTCCAAC TCCATGTAGA 
    GAAGGAAATT TCGAACGGAG GTCGCTTTCT ATATTTCTCT TGTCCTCTTC 
    TTCTCCCCTT CGTCCTCGCT ACCATCGCCC TATTAATATT CCTCAAAATC 
    CAAATTTGAG ACAACCCGAA TTCAGTCCTC AGCGAGTCGG AAACGCGCCG 
    AAAGACGAAC TGGAGGCGCC CCCCCAAATC TTGAGATCGC AGGATGGATG 
    GACATACAAA TGGCACTAAT GGTTCCTGCT CTAAGCCATG CGAGCCATTA 
    ACAGACTACT GCATCCCTGA TTACATTCTG AATCCTGACT CTGAACAAGT 
    CCTCGTTGAT CAGGCACCAT GTTGCCCTGT AGTAGTATTC ATCAACTCTA 
    GAAGTGGCGG CCAACTCGGA AGCAGTTTGA TCAAAACGTA TCGTGAGCTT 
    CTCAATAAAG CGCAGGTTTT TGATTTATCA GAAGAGGCTC CTGAAAAGGT 
    GCTTCACAGA TTGTATTGCA ACTTTGAGAA GCTCAAGTCT AATGGCGACC 
    CTATTGCTTT TCAAATTCAG AGCAACCTAA GACTAATTGT TGCTGGTGGT 
    GATGGCACAG CAAGTTGGCT GCTTGGTGTA GTTAGTGACC TTAAGCTCTC 
    TCACCCACCT CCTATTGCAA CTGTGCCTCT GGGAACTGGA AACAACCTTC 
    CATTCTCATT TGGATGGGGG AAGAAGAACC CAACCACTGA CCAAGAGGCG 
    GTGAAATCAT TTCTTGGACA AGTTAAAAAA GCAAGAGAAA TGAATATTGA 
    TAGTTGGCAT ATCATCATGA GGATGCGAGC TCCACAGGAA GGTCCATGTG 
    AACCTATTGC TCCGTTAGAG CTGCCTCACT CATTGCATGC ATTCCACCGT 
    GTATCAGGAA GCGATTCACT TAATATGGAG GGCTACCACA CATACCGTGG 
    AGGATTTTGG AATTACTTTA GTATGGGGAT GGATGCACAA GTGTCTTACG 
    AATTTCACTC TGAGAGGAAG AGAAATCCCG AGAAGTTCAA GAACCAGCTA 
    ACAAATCAGA GTACATATGC TAAGCTTGGA CTTAAACAAG GATGGTTTGC 
    TGCTTCACTA ACTCACCCAT CCTCGAGGAA CATTGCTCAA CTTGCAAAGG 
    TGCGGATCAT GAAAAGACCT GGTGGCCAAT GGGAAGAGCT TAAGATTCCT 
    CGCAGCATTC GATCAATCGT CTGTCTGAAT CTGCCAAGTT TTTCTGGAGG 
    ACTGAATCCT TGGGGAACAC CTGGCACCAG GAAAGTACAA GATAGAGACC 
    TGACTGCACC ATTTGTCGAC GACGGCCTTA TCGAGGTTGT CGGCTTTCGC 
    GATGCCTGGC ACGGTCTTGT CTTGCTTGCC CCTAATGGCC ATGGAACTCG 
    TCTAGCACAG GCCCATAGAA TCCGGTTCGA GTTCCACAAA GGAGCAGCCG 
    AGCACACGTT CATGAGGATC GATGGGGAGC CATGGAAGCA GCCTCTTCCC 
    AAGGACGATG ACACCGTGGT CGTCGAGATC TCTCACCTCC GTCAGGTCAC 
    CATGCTCGCC AGCGACCCGT GCAAGTCGAA GAGCGTCAAC GACCCCTCGT 
    CGCCGATGTG CTGTAGCAAC CACGACGACG ACGAGCGCAA CAGCTTGGAG 
    GACGAAGATG AGTGGGAGGA GGGGAGGAAG AAGTTTGGTG CAGCTGATAC 
    GTTCAAGTTC CCTGATGAGG TTGATGTTGC TCACCTTAGC TGAGCTATAA 
    GTGATTCAGA GTTCAGATTT CAGAATGTTC GCTACTACTG TTAGCGATAC 
    TGCCTTTTTG GGGGTTTATA TATACTACTA GTTTATTAGT TATCAGCCCT 
    GTGTAGATTC GACCGGCTGT ATTCGAGAAC TGCAAAATTT TCCGAGTAAT 
    GTCATATTTT CATGC

    Gene models with high sequence identity

    1. AT2G20900.3 [+] show detail - diacylglycerol kinase 5
      E-value: 0; Score: 692.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther DIACYLGLYCEROL KINASE, ALPHA 1.7e-208
    HMMPanther DIACYLGLYCEROL KINASE 1.7e-208
    HMMPIR Diacylglycerol kinase, plant 0
    HMMPfam Diacylglycerol kinase, accessory domain 2.1e-40
    HMMPfam Diacylglycerol kinase, catalytic domain 2.4e-26
    ProfileScan Diacylglycerol kinase, catalytic domain 21.857
    HMMSmart Diacylglycerol kinase, catalytic domain 1.5e-18
    HMMSmart Diacylglycerol kinase, accessory domain 7.9e-19

    See the detailed result >

    AT2G20900.3

    Model type
    Protein coding
    Short Description
    diacylglycerol kinase 5
    Computational Description
    diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR