K12915

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small) decreased length (PATO:0000574) (Seed::Shape::short) low brightness (PATO:0000327) (Seed::Color::dark)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K12915

Determination of introduced cDNA(s)

J033120E14 - Rice Full-length cDNAs - Original: J033120E14

full reading [+] show sequence

GTAAGAGTTG GGCGCGAGAG CACCGACGAC CCAACAACAC AAGACGAAGC 
GAGCGACGAG ACGACCTAAC CCCAAAGCGA AAAAAGTTGC TGCATCCTTA 
GCGCGCAAGC GAAAGCGAGA GGGAGCTCGC GCGCGCGCGA GGGATCGATG 
GATCGACCCC AGGTAGTTAC CGAGAACTAT GCCAATCCTG TGACGTGCCT 
CTTTCATGTG CTCTTCAAGG CTGGGGCGCT GGTGTTCTAC ATCTTGTTTT 
CGCTCTTCGT GAAGAGCTTC GTCATCATAT TCGTCATCAC CGTGTTCCTG 
GCGGCGCTCG ACTTCTGGGT GGTGAAGAAT GTGAGTGGCA GGATATTGGT 
CGGGATGCGG TGGTGGAATG AGATCGACGA CGAGGGCAAC AGCGTGTGGA 
AGTTTGAGTG CCTCGATGGG GAGGCTCTTG CTCGGATGAA CAAAAAGGAC 
TCGTGGCTGT TCTGGTGGAC TCTTTACTTG ACTGCTGCTG CATGGATCAT 
TCTTGGGATA TTTTCACTTA TCAGACTTGA AGCTGACTAC CTTCTTGTTG 
TTGGAGTTTG CTTGACTCTA AGCCTTGCAA ACATTGTTGG GTTCACCAGA 
TGCAACAAAG ATGCCAAGAA GAATATCCGG GGTTACTTTG AAGGTCATGC 
TCAAAATGCG ATCACATCCC GCATCACATC CACCCTGCAA TCAGCATTTG 
GAGTAATCTA AAATCCGAGC TCCAAACAGC AAGGCCCTTT TCGAATACAA 
CCATGTAAAA TCTGTCAAAA GGATTAGCGT GCATTATCCC ATTTCCATAC 
ATTTTTGTTG ACCCAATACA CCCAGTAGGT TGATTTTGAT TGGAAAGACA 
GAGAACACCT TGTTAGTACT ACTGCCTTCC AAAGGAGTAA AAAAGAAGTT 
TTTAGCCGAG AATATGTCTT GAGTCTGAGT GTACCCTTTA GGGATTTTGA 
CCCTGGAACC TGTCTTCCAA TGCAGCTTCT TGTTAATTCC ATATATTATT 
AATCATTTGC TGTGCTGTAT CTTAACGACA ATTTTCTGTA ATTTTATGCA 
TTCTCGCAAA ATGCCCGTAC ATGGTTACGT GATTG

Gene models with high sequence identity

AT1G09330.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 2e-74; Score: 276.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF846, eukaryotic	5.6e-47
Coil	coiled-coil	0
HMMPanther	Protein of unknown function DUF846, eukaryotic	3e-53

See the detailed result >

AT1G09330.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).
Link: InterPro Scan - TAIR