K05102

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05102

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05102

Determination of introduced cDNA(s)

  • J033148A20 - Rice Full-length cDNAs - Original: J033148A20

    full reading [+] show sequence

    Nucleotide sequence: J033148A20 - full reading 
    GATGTAGTGG TCGAGGGTGC CGTTTGAGAC AAACTCATAA ACTAGCATGG 
    GAACTTCGAC TTCAAGACAA CAACCGAGCA ACTTGACGAC GTTCTTGTGG 
    TTGATCTGGG AGAGGATGCA CATCTCCTTC GCAAATTCCT TGGTCTGTGC 
    CTCCTCTATC ATCTTTGACT TCTTGATGGC CACCACCATG TTGTCCTCCA 
    GGACGCCTTT GTAGACGATG CCGTAGCCAC CGCGGCCAAG AACACGGTCG 
    GCGGCAAAGC TGTTGGTGGC CTTCTCGAGC TCTTCCTTGG AGAAAATCTT 
    GAACCCACCC GCTCCGCCGC TGGTGCCACC TTAGGAACTC ATCTGTTGCT 
    GGAGAAGCAC GCCACCGTTC TGCTCAAAGA ATCTTTGCTT CGTTCTGATG 
    AGCTTCCTCT TTTGGAGCCC CAGGTAGAGC CAGAACAACA TGAACAGTAA 
    CAGGAACACA CCGACGCTGA CCCCTGAACA TGGTATGCCA ATGATATTCA 
    TTAGTTCCCG ACAAGAAAAT AAGTGCATTA ATAATGTTGC TTGATAACCG 
    GCCGATTGAA TACCTGTAAC GACTTTCAGA GCTAACGTGA ACTTGTCCGT 
    TGGGAGGCAT CCATTCTCCT GGGTTGCATT TCCACTAGTC CCCGGTCGGC 
    ATTCGCAGGT GTAGCTTCCG ATTGTGTTTG TGCATTTTCC GAAGCATGGG 
    TATTCCTTTG TGCGTTGGCA TTCATCGATG TCTAGCGTTG GCAAAGCAAA 
    ACATATTCAT CACTTAATTT TTTTTTTGTC AGAAAGATTA TTACTCCTTT 
    TGCGTTTTAG GCACCCACCT TTGCATCCAC CGTCGAGGTA GGGGTTGCCC 
    TCGTAGCCCT TGGAGCACCT GCACCGGTAC CCCTGGCCGT CGCTGGCGTT 
    GAAGCACTCG CTGTGCGCGC TCCGGCACGC GTAGTCCGTC CTGTTGCGCA 
    CGGCGATGTC GCAGTTGCCG GCGTTCCGGA TGGCCCAGTC GAGCACGACG 
    GGGACGGTGA AGTCGCTGGT TCGGTTGATG AAGGCGCGAT AGCTGTAGGT 
    GGTGTTGATC CACTTGTCCT CCGCCACGAA CACATACTGG CATTTTGTTG 
    AGTCGAGATG GCGGAAGACG GGTTCCGTCG GCGGGAGCTC CTGTTGGTCG 
    GGGACGTTTC GCGTTGGTTC CTCTGTCTTA TTCAACGTGA GTATGTAAGG 
    CTTGTAGACG TTGAGAGCGC GGGGCATGGT GTTCTGGCAG CACCCCGACT 
    CGCCGGTGCA CTGGCCCGGC AAGTCACCCT GCGACTGCGA CCGCCGGCAC 
    GTGGATGTGC AGCCAGTGAC GTAGTTATCG TCGGCGTCAA CCAAGTAGCC 
    AAGGACGGGG CACCCGAGCA CGACAAGGCG GTTCCTCGCT GTGGAGAACC 
    GGTAGGCGAT GCTGCGGCCG TAGTCCGGCG TGCGGTAGTG CCCACTGATT 
    GCTTTGAAGC GGTCGTCGTG GCAGTTGCTT CCCGCGTCGA CGAAGACCCG 
    GACCTCGCCG TCGGCGATGG AAAGGCTCAC CAGCTTTTTC TCACGATCAT 
    CCAGGTAGTT GAAGTGCGGA GTGTTGCCGT CGCACTCGAG CTGGAAGTCT 
    TTGTCCCGGG CGCAGCCGGC GCCAATGCCG AAGGGGTAGG AGATGCTGAT 
    GTTCCCGCAC TTGTCGGGGC AGCCCGGCCA TGGCTGAGCC GATGCCGGTG 
    TCACCGGCGC CAAGCAGACG AGCATGACGG CTAATAAGTA GGCAACCGCC 
    TGATGCAGTG TACTAGTGGT AGCCATTTCT AACATGTATA ATCGCCTTCG 
    TGTTGTTCTT CTTGCCGTCT TGCTTTTACA TGCCGGCCGG GCTTGATATC 
    CATATAAATA GATCGCGCAC AAGCTTCCTT CCTTCGTTTT TTGGAGGGCA 
    AATATGCCAA GATCAGGAGG ATGTGTCATG GAAGCTGCGT CGTGTATTAG 
    GAGTTGACTG AAAGAACACG CGGCGACGTG TTCTTTTCTT AGAGGGCGCG 
    CTGTGTTTAG TTCCCAAAGC AAAAAAAACT TACGCTGTTA AAACAAAAAT 
    TTTTATGCTG TCACATCAAA TGTTTGAATA CATGTATAGA ATATTAAATG 
    T

    Gene models with high sequence identity

    1. AT1G21250.1 [+] show detail - cell wall-associated kinase
      E-value: 2e-61; Score: 234.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart EGF-like calcium-binding 1.1e-08
    HMMPanther WALL-ASSOCIATED PROTEIN KINASE 3.1e-53
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 3.1e-53
    HMMPanther GAG PROTEIN 1.7e-09
    HMMPanther GAG/POL/ENV POLYPROTEIN 1.7e-09
    HMMPanther ONCOFETAL-LAMININ BINDING COLLAGEN-RELATED 1.7e-06
    HMMPanther COLLAGEN ALPHA CHAIN 1.7e-06
    Gene3D no description 1.7e-23
    ProfileScan EGF-like, type 3 10.907
    ProfileScan Protein kinase, catalytic domain 14.973
    HMMPfam EGF calcium-binding 8.2e-07
    HMMPfam Serine-threonine/tyrosine-protein kinase 6.2e-18
    PatternScan EGF-type aspartate/asparagine hydroxylation site 0
    PatternScan EGF-like calcium-binding, conserved site 0
    PatternScan Protein kinase, ATP binding site 0
    superfamily EGF/Laminin 9.1e-08
    superfamily Protein kinase-like domain 2.4e-28

    See the detailed result >

    AT1G21250.1

    Model type
    Protein coding
    Short Description
    cell wall-associated kinase
    Curator Summary
    cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides.
    Computational Description
    cell wall-associated kinase (WAK1); FUNCTIONS IN: kinase activity; INVOLVED IN: cell surface receptor linked signaling pathway, response to virus, defense response to fungus, response to salicylic acid stimulus; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 3 (TAIR:AT1G21240.1); Has 130372 Blast hits to 120319 proteins in 4569 species: Archae - 123; Bacteria - 13482; Metazoa - 56283; Fungi - 9380; Plants - 33196; Viruses - 438; Other Eukaryotes - 17470 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR