K04215

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04215

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04215

Determination of introduced cDNA(s)

  • J013036L21 - Rice Full-length cDNAs - Original: J013036L21

    full reading [+] show sequence

    Nucleotide sequence: J013036L21 - full reading 
    GAATTCTGCG CGGCGATGAG GGCCCAACGA CCGTCGTCGG CAGCTGCTGG 
    CAATCCGGTG CTTGCTCTTC TGTTTCTATG GGTCCTTGGC TGGGGACATG 
    TAACGGCGGA AATTGATATC GCCAACATGA CGGCGCTACA TAAACATGTT 
    TCGTTCTTCG ACCGGAACAA GGATGGCATT ATTACTCCGT CGGAGACCAT 
    TGAAGGGATT GTTGCAATCG GTTGTGACTA TGCATTTGCT AGAGACTTTG 
    CCGCCCCTGT GCATGCTGGT CTTGGTCCTA AAACAAGCCC CAAGGACGCA 
    CCATTACCTC ACTTGTCGAT ATACATAAAG AACATCTATA AAGGAATGCA 
    CGGGAGTGAC ACAGGTGCAC TAGATGCTAA AGGAAGGTTT GTTCCTGCAA 
    AGTTTGAGGA AATTTTCTCG AAACACGCAA AAAATAGACC AGATGCATTA 
    ACATCCTTGG AGGTCAAAGA GATGATTCTA GCAAATCGAG ATCCAGATGA 
    CCCACAATCA TGGGCTGCAC CTATACAGGA GTGGGGGCTA ATTTATGGTC 
    TTGCAAGTGA TAAGAACGGA TATTTTCACA AGGATAGTGT GAGAGGTATA 
    TATGATGGTA GTGTGTTCGT CAAGTTGGAG GAAGAGAGGG CATCTTCACA 
    AAGTACAGTT TGCCGGAGCC TATCATTTAG GAGTACTGTA TAAAGTAATT 
    GGGAAATGAA GTTATCCCAA ATACATTGTA TTGCATCATA GGTATTGTTC 
    GTGTACTTAC AAAATGCCAT ATTTGGAGAA GCACTGGTGT ATGGTAGTGG 
    AGTTATAGTT GCATGACTTT AATCATTATG ATTTAAATCT TGGTTTATAT 
    GAATATTATG TATATACGGA TGCACTCTTA ATAAGATTTG

    Gene models with high sequence identity

    1. AT1G70670.1 [+] show detail - Caleosin-related family protein
      E-value: 2e-44; Score: 176.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Caleosin related 1e-66
    ProfileScan EF-HAND 2 9.13

    See the detailed result >

    AT1G70670.1

    Model type
    Protein coding
    Short Description
    Caleosin-related family protein
    Computational Description
    Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70680.1); Has 341 Blast hits to 336 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 278; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR