K01527

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01527

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01527

Determination of introduced cDNA(s)

J013074C02 - Rice Full-length cDNAs - Original: J013074C02

full reading [+] show sequence

GAGTCGCGGA GTCGGTAGCA TCGGGGCGAG GACTTGGAGG CGACAATGGC 
GTGCTCTCTC CTGCCGCCGC TCGCTCCCGT TTCCCCTCCG CCTCGTCTCC 
TCCTCCCCTC CTCCCGCTCG GCTCTGCTCC CTCGCGGTCC TAGGGTTGCG 
CCCCGAGTCC CCGTTTCCCC ACCGCGCGCG CTGCCGGACA CCGCTGTGGG 
GGCGGCGGAG GCGCTCCGTG GCGCGCTCGC CGACGCCTTC CTGGCGTCGC 
CTCCGACGTG GAGGTCGGCC GCCGTGAGCA ACCTCGCCAT CTTCGTCGCC 
GACTCCCCGG TGCTCCTGTC TGGCCTCTCC GCCTCCGGTT TCGCCGCCGC 
GTACCTCCTC GGCACCCTCA CGTGGCGCGC CTTCGGGCCC AAGGGGCTCG 
TCCTCGTCGC CTCCTACTTC GTATTGGGCA CAGCAGCAAC TAAGTTGAAA 
ATAAAGCAGA AAGAAGCTTT GGGGGTGGCG GAGAAAAGAG GAGGAAGGAG 
AGGGACTGGA AGTGTTATTG GTTCCAGTGC TGCTGGTTGT GTCTGTGCTC 
TGCTATCAAT CTACAATGTA GGCAGTGCAG CGTTGGCTGA GCTCTGGAGA 
CTTGGCTTCG TTGCTAGTTA TTGTACTAAA CTAAGTGACA CAGTTTCCAG 
TGAAATAGGG AAGGCCTACG GAAGAACAAC GTACCTGGTG ACAACACTTA 
AGGTTGTTCC GCGAGGTACA GAAGGTGCGA TCAGTATTGA GGGTACTCTA 
GCTGGAATTC TTGCATCGAT AATTCTTGCA AGTGTTGGTT ATCTCCTGGG 
GCAGGTTAAT GTATCACAAG GCGCAGTATG TGTCCTTGCA TCCCAGATTG 
CAAATTTTTG TGAGAGTTAT ATTGGTGCCA CACTACAAGA TAAAGAAGGT 
TTTGAATGGC TCACCAATGA TGTTGTCAAT GTACTAAATA TCTCAACTGG 
TGGTATATTG GCTGTTCTGA TGCAGCAGTT GCTAGTAAGT TGGCGCTCTT 
GAATACTTTT TTATGACTTC TTTTGTTCAG CCTCCGTTAT TATAACTTAT 
TATGGAGAAA TGACTGGTTG ATGGCAATGT TCTTACATGC TGCTGCCATG 
TGAAATGGAA GTATAAATTC CGGTCTTAGA GATCATATTT GAGCGGATAA 
ACATTTGTGG ATGC

Gene models with high sequence identity

AT1G78620.1 [+] show detail - Protein of unknown function DUF92, transmembrane
E-value: 2e-89; Score: 326.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	Protein of unknown function DUF92, transmembrane	5.4e-75
HMMPfam	Protein of unknown function DUF92, transmembrane	1e-63

See the detailed result >

AT1G78620.1

Model type: Protein coding
Short Description: Protein of unknown function DUF92, transmembrane
Computational Description: Protein of unknown function DUF92, transmembrane; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794); Has 865 Blast hits to 865 proteins in 301 species: Archae - 133; Bacteria - 238; Metazoa - 78; Fungi - 68; Plants - 85; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink).
Link: InterPro Scan - TAIR