K01018

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01018

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01018

Determination of introduced cDNA(s)

J023078J16 - Rice Full-length cDNAs - Original: J023078J16

full reading [+] show sequence

GACATCAGCA CTGACTCCAA TAACACGCTC ATCAAACAGC GCGCGCGAGC 
GAGGGATGGA TAGGATATTT TCGTTCGCGT TCGTGCCATC CTAAATCCCG 
TCTATAAAGC CGTGCACATC TCTATCCTCA CCTCCATTCC ATTCCACTCG 
CCAACCCGAC ACGTCTCTCA TCTTCACGCA ACGAACAGCA GCAGCAGCTC 
AAGCTAAGCT AAGCTAAAGT ACTACGTGTT CTTTCGTCTT CGTCGGCGCC 
GGAGTTTGAT TCGTCGGAGC TAGCTAGCAA GAGGAAGAAG AAAATGTTGG 
CCATATTCCA GAAGCAGGTG GCGCACGCGC CGGCGGAGCT GAACAGCCCG 
CGGAGCAGCG CGGCGAAGCC CAAGAACCCC GACGAGATCC TCAGGGACTT 
CCACGCCCTC CACCCCATCG AGGCCTTCTC CACCTCCTTC GGCGGCGGCG 
CCGCCCTCGC CTGCGTCGCC GGCCACGCCC GCAATGGCCT CTCTGGCTAC 
GAGAGGATGT TCTGTGGGCT GGATGACATC TACTGCGTGT TCATGGGGAG 
GCTGGACAAC CTGAGCAGCC TGATCCGGCA GTACGGGCTG TGCAGCCGCT 
CCACCAACGA GGCGCTGCTC GTCATCGAGG CCTACCGCAC CCTCCGCGAC 
CGCGGCCCCT ACCCCGCCGA CCAGGTCGTC AAGGATCTCT CCGGCTCCTT 
CGCCTTCGTC GTCTTCGACA ACAAGTCCGG CGCCGTCTTC GCCGCCCTGA 
GTACGGATGG GGAGGTGCCG TTGTATTGGG GGATCGCGGC GGATGGGTCG 
GTGGTGATCT GCGACGAGAG GGAGATCGTG AAGGGAGGGT GCGGCAAGTC 
GTACGCGCCG TTCCCGGTGG GGTGCATGTT CCACAGCGAG GGGGGGCTCA 
AGAGCTTCGA GCACCCGATG AACCGGCTGA AGGCGATGCC GCGGGTGGAC 
AGCGAGGGCG TCATGTGCGG CGCCACCTTC AAGGTCGACA CCTTCACCAA 
GATCAACTCC ATGCCCCGCG TCGGCAGCGC CACCAACTGG GCCGCCACCT 
GGGACGACGC TGCCGCCTGA TGATGGCGCT CCGTACGCCG TCGTCTCGTC 
GCCGTGCGCC TGCCCTCGCC GCCGGCCTCC TCGCCGTTTG CCGCCGCCGC 
TCATCTCTTC CTCCTCTTCT TCCTCCTCTC TATATCCGAT GTGCTTCTCC 
GTCCGAAGCA TGCAGATTAT TAGAGCGATA TTTGCAGCTA GCGTGGAAGC 
GCGCCAATCT ATTTTTCTGC GGTGTTTTTA CTTAATTTTC ACCTCTTCTT 
TTTAAATTTT TATGTCCATC TTTGGGCTCT CGCCTCTCGG CAATGTATAT 
TCTCGGTCGC GGGTGGCATG TCATGGTACA TACTATGAAT GATGAATAAG 
AAAGAGTTTG CTTCACTC

Gene models with high sequence identity

AT4G27450.1 [+] show detail - Aluminium induced protein with YGL and LRDR motifs
E-value: 3e-88; Score: 322.00

InterPro Scan Digest

Program	Description	E-value
superfamily	N-terminal nucleophile aminohydrolases (Ntn h	4.3e-29
Gene3D	no description	4.1e-16
HMMPanther	ASPARAGINE SYNTHETASE	1.7e-05
HMMPfam	DUF3700	4.3e-47
HMMPfam	DUF3711	1.5e-33

See the detailed result >

AT4G27450.1

Model type: Protein coding
Short Description: Aluminium induced protein with YGL and LRDR motifs
Computational Description: Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR