GT7356

CSHL Arabidopsis genetrap mutant lines

Original: GT7356

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT7356

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1283707 [Map]; Strand: c
      • AT5G04500.1 - [+] show detail - glycosyltransferase family protein 47
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT7356 - 3-prime edge 
    TTACCGACCG TTTTCATCCC TAATCAACAC CGTTACAAAT ATATCTCAAA 
    TTACGGCGTC GGGAGGCGTT TTCTGTTCTT CT

AT5G04500.1

Model type
Protein coding
Short Description
glycosyltransferase family protein 47
Curator Summary
a member of the Glycosyltransferase Family 64 (according to CAZy Database)
Computational Description
glycosyltransferase family protein 47; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: embryo, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 971 Blast hits to 969 proteins in 180 species: Archae - 4; Bacteria - 178; Metazoa - 489; Fungi - 8; Plants - 111; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).
Link
InterPro Scan - TAIR