GT5556

CSHL Arabidopsis genetrap mutant lines

Original: GT5556

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT5556

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5354090 [Map]; Strand: c
      • AT3G15830.1 - [+] show detail - phosphatidic acid phosphatase-related / PAP2-related
        Distance: -884; Region: promoter
    Flanking Genome Sequence: GT5556 - 3-prime edge 
    AAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCTACT 
    TAACGGGACA GGTACACCGA TCCATGATCA TAAATACTTG GGTCTCAGGA 
    GAAATTAAGC AACGGATCAC AATTTATTTA TTTTGTCCTT TTTCTTGGTT 
    GAGAAAATTC TTGAATAATA GTCTTCAAAT TTGTTAGTTC AACTAATATA 
    TAGATCAACC TTGAGACAAT AATAAAATGA AAGATCAACA TGTGAACATT 
    TATAATGCTT TGGTGGATAA AACTCAACCT TTGATCAGAT ATTTTAATTG 
    TAAAGCTCTT GAATAAATAA AACTCAACTG ATACATCAAC TTACCATTGG 
    GGATTTTAAC AAGAGTCATG AGAGATATAA ATATGTATGA ATAATATACC 
    ACTATATGAG GGAGTAATTT AACAAGATAC GCGATATTTT CAGTTTTTGT 
    ATGGTTATTT TGTAGTGTGC TACTTTGTAT CCCTTTTTAT TATTTTGTAA 
    TTTTTACTAC TTTATCTATC CTCTAAAAAA C

AT3G15830.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase-related / PAP2-related
Computational Description
phosphatidic acid phosphatase-related / PAP2-related; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G15820.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link
InterPro Scan - TAIR