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GT24573

CSHL Arabidopsis genetrap mutant lines

Original: GT24573

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24573

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28672872 [Map]; Strand: c
      • AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT24573 - 3-prime edge 
    CGTTACCGAC CGTTTTCATC CCTACCCATA CTAAGCCAAA CAACATAGTG 
    ACAATACTAT TGAAACAAAA CACATGAAAT GGGAAAAAAA AAGTTAAATA 
    TTTCGTTAAA CCTTTCTTTT CAACTTGGGG ATTTAAAAAG TTAACACATT 
    AATGGAGAAC AAAAACATCA AATTTCTATT ACATTCGCAA AGTTAAAAAG 
    AATTTAAGGT TATAAAAAAT GGACGTGTGG GAATAAAAGT AACAGGGTTT 
    AAATTACTAG TTTCACACAC TAGTAGTATA AAATTTTTGG TTTCAAAAAG 
    TCAACTCATA AATTGACAAG AGAAAAAATA CAAATTTTTT TAAAGAAAGA 
    AATGCACGAG TGAAAGTGAA ACGCACGAGT GAAAGTAAAA AAGTGTTAAT 
    TTACCTTACA CGTGTGGCGG TGTGAATGGT CGTTTTCGAG GCGATACTCA 
    GGCATGACCC ACTTAGTCTT GAGGCCACGT GGAGCCCTAC CTTTGTAAAA 
    CACCAACGTC TTCTTCATCC CAACAAGCTA TCCTCCTCCG CCGGAAAAAA 
    CTTCCTTATC TTTGCCGGTA GCTTTCCAGT ATCCAGCAGT AGTTGCTCTG 
    TTAGTCCTCA AACCTGTCGG ATATTTCCTG TCCCTTAAAC TATAAAAGTA 
    CCACTCTCTC TCTCCCATCT CCGCCATTTC TTCATATAAC AACAATTTCA 
    AAACGTTACA CTTTTTTCTT GTTAAAGATT TATCAAAATA TTCAACTAAA 
    AACA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28672773 [Map]; Strand: c
      • AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT24573 - 5-prime edge 
    GGAGGACAGG GGAGAGAGCA GTTTAGATGT GATAGATTTG ATATAAACCT 
    GTACGTGTGG TGTGGATGTC AACACCAAAC ACACCTTGCC GTTTTCTTCT 
    CACTCGACTA CTGTTGTGTC GTTTTCCATC ACTATTGCTT TCTTTTGTAT 
    CCCACCTTTC TAATTACATT TATCATTATC AGAAATCAAT TTGTCAGGCT 
    CACATTTCAA ACAAGATCTT AAGGTGTAGG CATTATATAA TGTGTAATAA 
    CATGTTTTGG TTTTTCATCT CACTCGA

AT1G76420.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator Summary
Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.
Computational Description
CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR