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GT24507

CSHL Arabidopsis genetrap mutant lines

Original: GT24507

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24507

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 72137 [Map]; Strand: w
      • AT4G00170.1 - [+] show detail - Plant VAMP (vesicle-associated membrane protein) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT24507 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TATTCTCACA GTCGTAAACC 
    CTAAAAAAAA AAACAGAAAA ATCAAATTTC AATCTCGAAG GATCTACAAA 
    AAAGCATGAC GACCGGAGAT CTCGTTAAAA TCCCTCCCAC TGAGCTTAAA 
    TTCCCCTGGA AGTTTTTTTT TTCCCAATGA TTCCACCCCC CCCGGAATCC 
    TCTCCCCCCA AAAAA

AT4G00170.1

Model type
Protein coding
Short Description
Plant VAMP (vesicle-associated membrane protein) family protein
Computational Description
Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1100 Blast hits to 1071 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 430; Fungi - 141; Plants - 437; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).
Link
InterPro Scan - TAIR