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GT24418

CSHL Arabidopsis genetrap mutant lines

Original: GT24418

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24418

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163709 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -245; Region: promoter
    Flanking Genome Sequence: GT24418 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTTTCA ACAAGATGGT 
    ACTCGTGTGC ATCACATGCA ACTATTAAGT ATAGCTTGTA GATTCATGTT 
    TATTTCAAGA GTATATCACC TTGTTATTCA ATTACCTTCT TTTCTGCCAA 
    GTAGAAATTT TAGAATTAGG GTTTGGATGG TTATGATGGT TAAGGCGGAC 
    AAAATCGTCA ATGGATCAAA CCTTTTTTTA TTTACCATTC ATCAATTATA 
    GTACGCAGTG GTCCGGATAA AAAATAATAA AAGAAAACCG CAACGGACCA 
    TCTACGGACC GTTTTTACAT ACAAATAAAC TTGATCCGCA GCGATTTATT 
    GTCCACCCAA AAATGAAGTA AACTAAATAG CAAACAAATT AAACCGTTTT 
    GTCTGCTGCA TCCATTCAAA ATCTTAAACT CGCTAAAATA TGAACAAGAC 
    AAAATAATAA AGCGGAGGTA AAAAAGAAAA ATATGCCATA AACTCCAAAA 
    TTGTATTTTA CAAATACCTA ACGTTCTTTA AATTATATCG AGGGTCGCTA 
    GTATTTAAAA GGAAAATAAT AGTGATAAAA GTGCTAACTT TTGTGGGAAA 
    TGGATTCTAG GTTGAAAAAA ACAGGACTTT TGTAAGCAAT TTTCAACTTA 
    ACAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163793 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -161; Region: promoter
    Flanking Genome Sequence: GT24418 - 5-prime edge 
    TGAAATAGTG GTAGTACAAT TTAAGAGAAA TCCAAATACT AATTAAAAAA 
    GCCATCATGA TTAAAATAAT TAGGCTTGAA ATCGTACGTA GTCAAAAGGT 
    TTGTCCATTA ATTAAGAAAT TAATAAAAAT GGACCATCAT TTCCACGTAT 
    CTACAAATCT CTCTTACCCC CATATGCACA TGTCTGCGAA CCCCATCATT 
    TAAAGCCCCA ACGTAGCAAC CTCACCGCCT TCAATCATCA AACATCCAAA 
    CTCTATCCTT TCGTTTTCTT GTCAAACAAA AACTAATACT AGATGGGTAA 
    CAGTTTAGGC GGCAAGAAAA CGACCAAAGT CATGAAAATA GACGGCGAGA 
    CTTTTAAACT GAAAACTCCG GTGACGGCAA AGGAGGTCTT GAAAAACTTT 
    CCCGGCCACG TCTTGTTAAA CTCCAAATCT GTCAAGCACT ACGGTGCCCG 
    AGCCAAACCA CTTGAGGTAT GTTTTGTTTT TTTCTATCAA AACTATATGT 
    TATGTTTCTT GTTAAACTAC ACGAATCATG TTTTGATAAA CAAAGCGTTT 
    AATGTTGTTT GGTGTGTAAA CAAAGCAAAG GTTGAAGGCA AAGCGGCTTT 
    ATTTTGTGGT GAAGCCGGTA AAAAAGTGTC CACCGAGAAG GGTAAAATCA 
    GGAATTCACG TGAGTGC

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR