1. Home
  2. Mutant Lines
  3. GT24340

GT24340

CSHL Arabidopsis genetrap mutant lines

Original: GT24340

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24340

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11191874 [Map]; Strand: c
      • AT5G29560.1 - [+] show detail - caleosin-related family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24340 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTTAGG GAGACGATCA 
    TCGAGATCAG TACGGACTCT CCTCTCCGCT GTGACAGGGG CTTTCTCAGC 
    CACCGTAGCA ATCGAATCTG CTCTTGCGTG ATCTGTCGAC ATTTTGTTTT 
    TCCTTGTTGC GTAATTGTGG ATAATGGAGA GAGATTTTTC TTTTATAAAG 
    AGATGTGAGA GAGTGTTCTT AACTGATTCC AAAGAAGTCG CGGGAGTTGC 
    TTCGCCATTG AACAAGAACT CTTTTGTTGA CACGTGTTCC TATGACTAAG 
    GATTTTTGCT TCTTTTTTTA ACATCGCTTT TTAAATAAGA GTTTGGATTT 
    GATGTTTAGT TTTTGGATTG TAGATTTTCG TTTAAATTTT GCTATTAAAT 
    TTTTGTTTTA AAAATACCAA AAAATGCTTT TTGGTTTTTG AGAAAAAATA 
    ACATAAATGG ATTCCTAATA AGTTTTTTTC TTTGTAAAAA ATCTAAAGTC 
    AGTTGGTCTT GAATCCAAGT TCGATGGGTG TTTAAACTTA CGTGTTACCA 
    GCATGCCACA ACAATTTATT CATTTCCTAG TAAGTTGTTA TTTGATTTAA 
    TATATCTTAC CCACACTAGT TAATTTAGTA ATTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11191780 [Map]; Strand: c
      • AT5G29560.1 - [+] show detail - caleosin-related family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT24340 - 5-prime edge 
    GTTCATACAC TCTCTCTCTC TTTTCATCTT GGTCTTTTTC TAACAGTTTT 
    TGTATATGTT TCCAAATTTA GAATCATATT TATGACTTTT GTCCGAATCT 
    CTCTCTCTTT CAAGATTTTC TCAAAATTAT TAACTTGATT CACAAGCTAT 
    GAAATGTTTT TGTTTGGCTA CTACACAAAT ACAAAGTTTT GTTGAAAACA 
    ATATCCATAA TTTCTCTTTA GTGGTTTGAA ATGGTTTTAT CATTTTGTTA 
    GTGGTGCCTT TATTGTGAAC ACAATTGTAA TTTGTAAATT GCATTTTTTT 
    TTTAATTAAA CGTTGCGTTT ATTTTTGACA AGGTTGTTTG GGGTTTGAAC 
    AAAAAAAATG TGCCCCGAGC AAGGGTTGCC CCAAACATGG AAAACTTTAA 
    GGGGACAAAA GGACACAACC CCCGGGACAT GTCGGTTCTT CAGCAACACA 
    TTGTTTTTTT TGACCAGGAG GGGGAGGGTA TCATCTCCCC CTCAAAAACT 
    TTTAGAGGTT TCTATAAAAA TCATCTTTTT ACCATTTAAT TAGGGAAAAA 
    AAAAAAAG

AT5G29560.1

Model type
Protein coding
Short Description
caleosin-related family protein
Computational Description
caleosin-related family protein; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS THALIANA PEROXYGENASE 2 (TAIR:AT5G55240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR