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GT24333

CSHL Arabidopsis genetrap mutant lines

Original: GT24333

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24333

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 288469 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24333 - 3-prime edge 
    CGTTACCGAC CGTTTTCATC CCTACATTTT AGGCAGGAGA GGTTTTGTGT 
    ATTTCATCAG CATACTGGAG ACCGATGTGC AGGTGAATCT CACCGCTAAG 
    TGAAGCTCTC CTCTTTTCTT AAGACCAGTA GGTTGTAGAA CAAGTAAAGG 
    GTAAGCGTGC GTGTACACAC GGCCCGTCTG AAGAGTCGAG AGTCTAATGC 
    GGACTTTCCC AATCGGCTGA TCTCTCTTGT TTCCGCCATC TCCTGCTGCG 
    AAATGAGCGT TGTCTAAAAC GCAAATGGTT AAAACCGTTG CAGGATCAAA 
    AACCTCCCAT GTGTATTGCT CATTGTACTT TGGATTCATG CTGTTGATCA 
    CAGTTCGTGA TCGAACCCAT TTGTGACCGT ATTTGGCAAC AACGTACGTG 
    TCCGAAGTAC CTTTCCCTTC CCGAGTTTTC ATCGAATGAA ACAAATTTGC 
    GTTAAGTATC CCGAGCTCCA AGACTCCAAT TGCTGATTTC CAGAGCTTTC 
    TTGACGAAGG TCTGAGATCA CTGCTGTTAT ACATGGACTC ATCAAAAACG 
    TGGTAGCCTC CATCGAGAAC CGCCTTATAT CGGAGCCTAG TAGCGAATTT 
    CACTTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 288554 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24333 - 5-prime edge 
    CTCCCTGGCT AAATGCATTA CATACTACCC TTATCCACAA ACCAACAGGA 
    AGCTCTTAAG ATGCAGGCTA TCAACATAAT TATTGTTCGT TTAGGCCGGT 
    CCGAGCCACC GCTGAGACGG GAAGTGGTTG ACTATTTGAC AGATTGGAAA 
    AGTCAGCTGT TCAGCATGAG GAGAAGCAAA GCCAACTTCA ATAGGTTCAC 
    GACAGTGTTC TCCGGTGCGC TGTCTGTTTG GAAATGGATG GAACAAGTGT 
    GCACATGGAA GACTCCCGTG ACGACGGCTC TGGTGCACGT GCTCTACACT 
    ATGCTTGTGA CGTTCCCGGA GATGATTTTG CCGACTGTGT TTCTGTATAT 
    GGCTGTGATT GGGATGTGGA ATTACAGGTT TAAGCCTAGA TTTCCTCCTC 
    ATATGGACGC CAAACTATCT TATGCAGACA ATGTAAATTC TGATGAGCTT 
    GACGAAGAGT TTGATACCTT CCCGACCGTA AGGGCTCCGG TCTCCGGACA 
    TTGTGAAAAT GAGGTAACAA AAATCAAGAA TGATCAAAGA AAATCGAAAA 
    CGAAGAAAGA CTTGGTCATT GGTTGATAGT TTTCCTCCCT CATATTTTTC 
    AGGTACAACC GGCTGAGATC TGTGGCCGGG AAGGTACAGT CGGTGGCTGG 
    AGACATACCC GCACAAGGAG AGCGAGTGCA AGCGTTGCTG AGCTGGCGTG 
    ATCCACGCGC CACCG

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR