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GT24303

CSHL Arabidopsis genetrap mutant lines

Original: GT24303

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24303

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 113177 [Map]; Strand: w
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -4566; Region: intergenic
      • AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: -1798; Region: intergenic
    Flanking Genome Sequence: GT24303 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCA CTTGTGGGTC ACATTATTTG 
    ACAGCAGGCC TACTAATTGG TTCCACGCTG GAATCTGCCA AAGAAGAAGA 
    AGAAATCTCT CAACTCTGTA TCATCTTTCC ACTGTGATCC TGTCCGTAGA 
    TTCCTCCTTA TTTTGCGATT CATCTCACTC GACCAGATCG TACCGTTACC 
    CGACCGGATC GTATCGGTAT ATTCTTCTCT CTCGACAAGA TCGTACCGTT 
    ACCCGACCGG ATCTTATCGG TATATTCTTC TCCCTCGACC AAATCGTATC 
    GGTACCCCAC CCGATCGTAT CGGTA

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01190.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
Link
InterPro Scan - TAIR