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GT24284

CSHL Arabidopsis genetrap mutant lines

Original: GT24284

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24284

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 64687 [Map]; Strand: w
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT24284 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT AATTCAACAA CCGTTTGACT 
    GAAGTGAGAT ATCCAAGAAA GTTGTCATTG GTTATAGATG TACCATCAAA 
    AATATTTGCC TCCATTAGCT CCGGCGCATT CAGACAAAAC CCGGGACATC 
    TTAAGTCTTC AATCAGTAAG TATTTCAAAG AAGGAGCATT TATCACATAT 
    CCCCAAAACT CTTGTCCATC ATGGTCGTCA TTAATCGTTA ATCTCTGCAA 
    AGAAGGGACC TCGTCAACAG TGAAAACCTC AATATCAGAA TCTTCACCTC 
    GAATCACAAG CAATTCTTCA AGAATAGGGC AGCCTGATAA AAGGTTACGG 
    ATAGATGATT CGTCTTTGTA GCTCACAAGC TCAAGATGGA GAGTCCTAAG 
    AGACTTCATT ACTACCGGAG AAGAGATATC AACAAGAATC AAAAGTACGA 
    GTCTCAAAGT CTCAAGTGTG TTGCAAGTAC ACAAGCTACT CGGAAATTTG 
    AAAGCCGTCC CCGTCCCGGT ATCAGCAGCA ACGAGCACCA ATTCACGCAA 
    ATGTCTAGAA AACGCAATTC CAACCCAAAG TCCAATATCT ACAGGATCAA 
    CTTTTTCTGA TTCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 64780 [Map]; Strand: w
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT24284 - 5-prime edge 
    GATTTATCAC CCTGGGAAGG TAATGTTGCA ATCGTCAATT GACCCGTTGT 
    TCATTGTCTC TATACACTAA TAATAATACT ATTTGGTCTC ATGAATAGAT 
    TACATATCCT ACTGGAAGTA TCTTCTATCA GCTGGTATCT CTAGAGATGT 
    ATACACGTGA AATAGATTGG TGGGATCTAC TTACGCTCAT GCTCGAACAT 
    TCTCCTAAAC TACAAGTTCT CAAGCTCACT GATGTAAGAC ATTTTATTAT 
    TAGTCAGCTA GGTATTTTTG TATGATCTCT CGTTTATGCT ATACATTGAA 
    TGATTATTGT CTCTTTGGTC TCAGAATTGT GTGAAATTTC ATAAAAATGG 
    TTTGCCGGGC GGCAAATGGA ATGAGCCAAA GTATGTCCCT GAATGTTTGT 
    TGTCGCATTT AGAGACATTT GTGTGGAGAA GATTCGATTG GGGAAAAGAA 
    AAAGAAAAAG AAATAGCTAC TTACATTCTA AAGAACGCAA GACGATTGAA 
    CAAGGCAATT TTCTCGACAA ATCCTGTTGA CTCGGAAAAG CTCGACAAGT 
    TGAAAGAAAG ACGTAAGGTG CACAATGAAT TAAATGGTGG GGTCAGG

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR