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GT24207

CSHL Arabidopsis genetrap mutant lines

Original: GT24207

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24207

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 362044 [Map]; Strand: w
      • AT2G01820.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -1363; Region: intergenic
      • AT2G01830.2 - [+] show detail - CHASE domain containing histidine kinase protein
        Distance: 939; Region: intergenic
    Flanking Genome Sequence: GT24207 - 5-prime edge
    TATTATTACT TACCAGTTTC ACTCTAACCT AGAACTATTC CTCTTCTTAT 
    GGTATTGAAT GTCTGTTTTT ATTCACTAGT ACTAAATATT ATAACTATAC
    TATTTTAAAA ATAGTTATAG TACGATATGT AGAAATTGGG ACATGTATAT
    TGTTGTTGTT AATCTTATAG AAAAATAGTA AAAGTAGCTA AAGATTGGTG
    TATTATACGC ACCAACCATA TACTATAAAC TCGCACGAAA TGTAGATCGA
    ACACTTGTGT ACGTAGAAAG ATTACGTGAC AACAACAACT AGTCCACTTT
    GCTGTTCGTT ACGGTCACAC ATCAACCACA TTTATTTCAC TTACTTCTTT
    TTTCAATCAT TTCTTAAATT CTCAATAATT CTAAAAATCA AATATTTGTC
    CAAACCTCTT TGGTGTAGTG GCACAAGGAA ACTTTAACTA TTATACCTGA
    GTTTGATTTT TCATGAAAAC AATAACATAT TTGTTTAAAA AGTCTGTCAG
    TTGTGATTTG GTCCAATTAA TTTATTTGGT AGTTAGAAAT GCAGACGGTA
    TGATTATCCT TGGTATTATT CGGAAGACAT TTTAAATTCA AACCTAACAG
    TGTAGTGACC CAATTCTACC TAAATCGGGA GAAATTCATT TTGTACTATC
    TCGTTGCGTT CCTACCGAAA CTG

AT2G01820.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01830.2

Model type
Protein coding
Short Description
CHASE domain containing histidine kinase protein
Curator Summary
Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane
Computational Description
WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 134660 Blast hits to 108037 proteins in 2975 species: Archae - 759; Bacteria - 119664; Metazoa - 32; Fungi - 2267; Plants - 2388; Viruses - 27; Other Eukaryotes - 9523 (source: NCBI BLink).
Link
InterPro Scan - TAIR