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GT24190

CSHL Arabidopsis genetrap mutant lines

Original: GT24190

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24190

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 99609 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: -2954; Region: intergenic
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -1040; Region: intergenic
    Flanking Genome Sequence: GT24190 - 5-prime edge 
    TAATAGTATG TTTCAATTAT TTTACTCATT CATAGTTTCA TTTAATTATA 
    TGATATACTT AAGTGTAGAA CATTGGAGAA GCATTTTTGG AATATAAAAA 
    GGAAGTGGGC GGTTTGTGAT TAATTCTTAA TTAACAACTG ACAGGGAACC 
    AACTAATTAA ATTATCCATC CTTTGTGAGA GATTGTTTAA TATATAAAGC 
    AATTCATAAT TTGTGAACTT GACCAAGATT TTAGCACGAT CCTCGCTTCG 
    CTTCATCTCA CTCGACA

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR