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GT24138

CSHL Arabidopsis genetrap mutant lines

Original: GT24138

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24138

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28601584 [Map]; Strand: c
      • AT1G76230.1 - [+] show detail - unknown protein; Has 26 Blast hits to 18 proteins in 3 species: Archae - 0; B...
        Distance: -1142; Region: intergenic
      • AT1G76240.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: 1227; Region: intergenic
    Flanking Genome Sequence: GT24138 - 3-prime edge 
    CCGACCGTTA CCGACCGTTT TCATCCCTAT TGGGTCCTAC ACTAATCAAA 
    GACTAATCAT TCGTGTTGAA GACCAATATC CTTTTCCATC TGTGTTATCT 
    TCTTTGTTGG GAGTTGGATT GAAGGCATAA CCAAATCCTA GTTGTCAATT 
    TTGGCATCGT TGTAACATTA TTCCAACCAA AGTAAAGCTT TTTATCAACA 
    ATAATACACG CAAGTTGCAT TTCAATGCAA CCAACCCAAT TATATCCCAA 
    CGGTAAACCG GATTCAGTAT TTTATGAGTG ATTAGTCCGG TTATTGAATC 
    CACAAGTCGA ACCGGTCATA GCACCCAACA CGTACCGCCG CTAAAAGGGG 
    AAAGATTCTA ATTTTGTAAG TTAGAGAAAA TTAATAATTA ACCAATTAAT 
    TGTTAAATTA ATAGCACTAT ATAAACTAAG GTTTGTTGTC CACCAAACCC 
    CACGTTTAAT ACGGTGTTAG TCAAATAATT AAGTCCTAAT CCGAATCAAA 
    TCAAAATGAT AATTGAAAAG CATCCCTAAC AAACCATGTG GTGGCATTCT 
    GATTTATCAC TAATTAAAAC TTAAGAAAGG CCACAAAATA TCAAAACAAA 
    TCCATCGACG GGAAATGCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28601490 [Map]; Strand: c
      • AT1G76230.1 - [+] show detail - unknown protein; Has 26 Blast hits to 18 proteins in 3 species: Archae - 0; B...
        Distance: -1048; Region: intergenic
      • AT1G76240.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: 1321; Region: intergenic
    Flanking Genome Sequence: GT24138 - 5-prime edge 
    ATTAAAAGTT AATAGCACTA TTTAGAAATT AGGATGAACT TTACATGTTC 
    CTAATAATTT AGGACTTCAA ATATCTTTAC CCAATTATTG GGCACTATTT 
    GTTATACATC AATTATGTAT AGTTGGTTAT TGTTGTCAAT ATGTATAGTT 
    GGGGTTTATT TAGATGTTAG GTTTTATCCT TAATATCAAG TGAATGTTTT 
    TTAATAATCG AATGTTTTCT TGTTACGACA CAAACTAATA TATATTTTTA 
    ACTTTCAAGA ATGTTTTCAT CGTTTAATAG CTGATTGTAA AAATGTATGC 
    ATATTTGTAT ATGCATTTCT TTTTGTCACA CTTTAGTTTC ATTTGTAAAT 
    GGAATATGGT TCAAGTCACA TATATCTATT CTATTGAGGA ATTCAATTTT 
    ACTTCGTGCC CAAAATGCCA AATAAAAAAC GGTGTACCTA ATTATCAGAA 
    AGAAAATAAC AAAATACACC GCATTTAAAT CATGTCTTAC AAAACTTTTC 
    CTTTTTTAAT TGGGGTTTTA ATTTATTTTC AGTTAATTGG AATCTAAACT 
    AGACATGTTA GGTTATGTTT AGCAATTATT TCTGGTTGAT TAATCATATA 
    AAATGATTCT CAGGTCTATT GAAAGTGTTA ACAATTGATG GC

AT1G76230.1

Model type
Protein coding
Computational Description
unknown protein; Has 26 Blast hits to 18 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G76240.1

Model type
Protein coding
Short Description
Arabidopsis protein of unknown function (DUF241)
Computational Description
Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17080.1); Has 409 Blast hits to 404 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR