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GT24045

CSHL Arabidopsis genetrap mutant lines

Original: GT24045

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24045

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5219346 [Map]; Strand: c
      • AT3G15470.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24045 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TACGTATATC GACGGTCACG 
    ATCACCACAT TGGCTAGTGG TAATGTCGGA TTTCGATCTC ACGATACAAG 
    AAGCACAACC GCCGACACTT TCAGAACACT CTCCATGATC TCGCCGAGCC 
    AATTGATTAC ACGAGATCGA TCGAGAAATC TCGAAGCCGG CGGCTCCGGT 
    ATCTTTGGAG CTGGAAGAAT CTGAAACGGG TTTTAACCGG GAGAGAACCG 
    GGTCACGGCT AAGACCCATT TCGTTTAAAA GCTTGGAACG CCTCTCAGAG 
    ACAGAAGCAG GTTCAGAGGT CCAAACGTCG AACTTCGAAG CTCCCATTGG 
    AAACCGAGGA ACAGGGAATG GGTATCGACG GCGGCGACCA CCACCGTAGA 
    GTTCTTCAGA GTCATGAGAA GCGGCGGAGG AGATCCGAGG AGAGGATTCG 
    GAATCGTAAT CAGAGTTAGA AGCGGAACAA GAGCAAGAAG AGGAAGAAGC 
    TAAACGATCA AGAGACTCGT AGAAGCAATC GTTGGTGTCT CCTCCTTCCT 
    CTTCTTCCTC GTTTTGGTAG CTCAGGGTCG TAGCTGTGAT GAAGCCAGCG 
    AAGACATTCC CATCGGAAAA TTCCTTCGCC GGTGAATTTG ATCAAACAGA 
    AACAAAACAA AAAAAACGCA GACTTTATAA AGCAAATTCT ATAAATATAT 
    TTGGTTTCTC AAGTCAAAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5219245 [Map]; Strand: c
      • AT3G15470.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24045 - 5-prime edge 
    TATCCTTGTT CTTGTTCCGT CTCTAAACTC TCTGTTCATC ATTCTTCACA 
    TTCAGAGATC AGTAGAACCA GCTCGCCATT TGTGAATTGC AGTGTAGGAT 
    CAGTTAGTGC TGATTCATTG CGGTTAAATG GAGATTCTGA TTGTGTACTG 
    AGAGAGAGTG TAGTGAATGA GGAAGTGGAA GTGTGTACTA TTAAGAATCT 
    TGATAATGGG AAAGAGTTTG TGGTGAATGA GATTCAAGAA GATGGTACAT 
    GGAAGAAGGT GAAGGAAGTG GGAACTGGAA CACAGATGAC GATGGAGGAG 
    TTTGAGATGT GTGTTGGACA TTCTCCCATT GTTCAGGAGC TTATGAGAAG 
    ACAGAACGTT GAGGATTCTG ATAAGAACAC GTCTAAGGAA AACGAAGACA 
    GTGGGAATAG TAATAAGGAT AATGCATCCA AGTCTAAGAA GAAAGGAAGT 
    TGGTTTAAGA GTATTAAGAG TGTTGCAAGT AGCATGACTG GTCATAGCAA 
    AGAGAGACGA AGCAGCGATG ATAGAGATAC ATCGTCAGAG AGAGGTGGTC 
    GGAGGTCGAG CTCTGCTACT GATGATTCTC AGGAATCTTC TTTTCATGGG 
    CCGGAAAGAG TTAGGGTTAG ACAGTATGGG AAATCATCTA AAGAGCTCAC 
    GG

AT3G15470.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54200.1); Has 35932 Blast hits to 22007 proteins in 749 species: Archae - 56; Bacteria - 5680; Metazoa - 13723; Fungi - 7656; Plants - 4267; Viruses - 6; Other Eukaryotes - 4544 (source: NCBI BLink).
Link
InterPro Scan - TAIR