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GT23850

CSHL Arabidopsis genetrap mutant lines

Original: GT23850

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23850

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 102020 [Map]; Strand: c
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: -121; Region: promoter
    Flanking Genome Sequence: GT23850 - 3-prime edge 
    TACCGACCGT TACCGACCGT TTTCATCCCT AGATATAGGT AGTGAGGAAA 
    TACCACAAGA AACCTTCATT TTATCTTCTT CTTGATCAAA AACAGTTTTC 
    ATGTACGCTA ACTAAGGGAA TTTAGCGAAA GCACTCGACT TTGATCTTTA 
    TCTTCAAAAC TCCATTCCTG TCCAAGTATG GAGTGAAGAA GAGCTGGCTT 
    GGGGACCCTT GTGCTCCAGT AAAATACCCT TGGAAGGATA TTAACTGCAG 
    CTATGTCGAT AATGAGTCTC CGAGAATCAT TTCTTTGTAA GATCCTCTTC 
    AAATGCTCGT ATATGTCTTT GATCTGTATG TCTTGTTCTC ACAAGAGTTT 
    GTTGATCTTC AGAAATTTAT CCTCGAGTGG CTTGACTGGA GAGATTGATG 
    CAGCGTTCTC AAACCTTACA TTGTTACATA TTTTGTTCGT ATTTTTCGAT 
    TTCATATGGA ATTCTTTTGT ATACAGATTT GTGAAACTGA TGCAACCAAA 
    ATTTCATTAC AGGGGCTTAT CAAACAACAT TTCAACAGGA AATGTAGATT 
    ACATAGACAC TGACTTCACT ATAACTTGAG GAATTTATAT TCATCTCACT 
    CGACCAGATC GTATCGCTAC CCGACCGGAT CGTATCGGTA TATTCATCTC 
    ACTCGACCAC ATCGTATCGC TCCCCGACCG GAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 101927 [Map]; Strand: c
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: -214; Region: promoter
    Flanking Genome Sequence: GT23850 - 5-prime edge 
    ATACTGTAAT TCATTAAGAA GAAGTTGAAG GTTACTTGGT TGCTCAAGAA 
    AACTCAAGAA TCTGTAACAC TTGCATTAAA CTTGTAGCGA GGAATGTCAA 
    ATATAGCAGA GAGATATAGA AGCACAAAAC AAAGAATTCT ATATATAACA 
    AGAAGTAGTC ATTCTCTCTC AAATCATAAT AAGCTAATAT CTCACATTGT 
    TGAGTTCTAG GTTACTCACC AACTGTCAAG ATAGATTGAA CAGCTACACC 
    ACATGCTTCA GCAGAAGCCA TCAAACCGAT AGCGAAAAGA CCAACAGATG 
    ATACTTTGTC TAAAGTCAAT ACCTTGTCCC TATCAAGCCC ACCAAAACTC 
    TTAGCCGACA ACATTCGGGT AATCACATTG GTCTTCCACC GATACAGGAA 
    CCACACAACT GAGAGAATAA CCGCTCCCTT CACAGTCGGG GAAAAGTATT 
    GAGCTGCTAT AGTTGTTGGC GCCACCATTG CAGCACTGCA GCATATCACA 
    TTCATCAAGT CTATCTATTT TCTACAACAT ACATGTCAAA GGAATAAAGC 
    TAGAGAGACT CACATTTGTG CAAAAGCAAT GAAGGTCACC AAGTAACGAG 
    CAGGATCCTC TAAAGCTCCC CAAAAGCTTT TCTCATAAGG AATGTCTTCA 
    TTAGAGAAGC CAACGGGAAG CAGTTTAGCG GAACTTTGCA TAGCATAAGT 
    GTGAAACCTT CTAAGAATCC TAGGCATCAC TATCCAAGCA AATAAAGTAC 
    CAGTCACAGT GAGACTAACA GGAACTATAA CATCTTTGAG ATACGGGTTA 
    GAGTCAAGGA ACTGCTGAAC ATGAGGAATC ATCTCATCAG AGACAT

AT4G00236.1

Model type
Pseudogene
Computational Description
pseudogene, similar to leaf senescence-associated receptor-like protein kinase, blastp match of 56% identity and 4.7e-52 P-value to GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated receptor-like protein kinase {Phaseolus vulgaris}
Link
InterPro Scan - TAIR