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GT23831

CSHL Arabidopsis genetrap mutant lines

Original: GT23831

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23831

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13438 [Map]; Strand: c
      • AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -79; Region: promoter
      • AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
        Distance: -89; Region: promoter
    Flanking Genome Sequence: GT23831 - 5-prime edge
    CTCTGGTTAT TTGGGTTTCT TTTCTAAAAA GCCCATTTGG GTTTTATTTG 
    CTTTATCTCA TGAGACTAAG CCCAAGCCCA AGGAAATAGC TTGCACGTGC
    GCGTCACGTG TCTACGATAA AACCCCAGCA ACGGCGAGCG GCTTTGCCTT
    GCTCATTCAA CCTCGCTCGT CGTCGTCGTC GTCTCCACTT CGATTTTTCA
    ATCAGTAATA TTGGTGGTTC AGAGATGATG ATGATGAATC TTTTAAGGAG
    ATCAGCGATA GCCATCGGCC GCCAATCAAA ATCGAAACTG GCGTCGTTTT
    CCTCCGCTAC ACAACCTTGT TCCGGAATCC CAAAATCGGT AAGGCTTTCG
    TATTTCATCT CACTCGA

AT4G00026.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00030.1

Model type
Protein coding
Short Description
Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR