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GT23593

CSHL Arabidopsis genetrap mutant lines

Original: GT23593

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23593

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21451456 [Map]; Strand: w
      • AT1G58020.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    2. Chromosome: 4; Position: 11113010 [Map]; Strand: w
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT23593 - 3-prime edge 
    CGACCGTTAC CGACCGTTTT CTCCCTAGGA AGATGGGCAG GGCGTGGTTC 
    CCGCTAACTT GGAGACAGAG TCAGTGCGGA GTTTGTGGA

AT1G58020.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 3.7e-49 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR