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Mutant Lines
GT23535

GT23535

CSHL Arabidopsis genetrap mutant lines

Original: GT23535

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23535

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 1748720 [Map]; Strand: c
- AT1G05810.1 - [+] show detail - RAB GTPase homolog A5E
  Distance: 0; Region: exon1 (CDS)
- AT1G05820.1 - [+] show detail - SIGNAL PEPTIDE PEPTIDASE-LIKE 5
  Distance: -962; Region: promoter
- AT1G05820.2 - [+] show detail - SIGNAL PEPTIDE PEPTIDASE-LIKE 5
  Distance: -962; Region: promoter

TTTACCGACC GTTACCGACC GTTTTCATCT GTCGGTGCCC TCGTCGTTTA 
CGACATTACC CGCCGCACCA CTTTCGAAAG CGTTGGACGT TGGCTCGATG 
AGCTTAAGAG TAAGTCTCGA TGTGAATTAT GCGATTGACT ATCGATTTAG 
GGGATCCTCA TGATCTAATT AGGTCGTACG GATTGACTTA GAATTGGGAA 
ATTTTGAATC TAGTTTTGGT AGATTATAGA ATTTGTGACC TAGCTAGAAC 
AAAACAGAGG ATTATTCAAG AACCGCTTAG GAAAGTATCT CATAATGAAC 
ATCTTTAGAT TGGTCTGAGA TCTAAAATTG ATTCATTTGC TCTTTTCTTG 
GTTGTTTCAG TCCATTCGGA TACGACGGTG GCGAGAATGC TGGTGGGGAA 
CAAGTGTGAT CTATAAAACA TAACAGCAGT GAGCGTGGAG GAAGGAAAGG 
CTCTAGCCGA ACAGGAGAGG ACTCTTCTTT GTGGAAGCAT CGCCTCTTGA 
TTCGACTAAT GTTAAAATAG CTTTCGAGAT GATGATACTT GATATCTACA 
ATAACGTGAG

AT1G05810.1

Model type: Protein coding
Short Description: RAB GTPase homolog A5E
Computational Description: RAB GTPase homolog A5E (RABA5E); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has 27587 Blast hits to 27548 proteins in 749 species: Archae - 23; Bacteria - 136; Metazoa - 14522; Fungi - 3761; Plants - 3260; Viruses - 20; Other Eukaryotes - 5865 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05820.1

Model type: Protein coding
Short Description: SIGNAL PEPTIDE PEPTIDASE-LIKE 5
Computational Description: SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05820.2

Model type: Protein coding
Short Description: SIGNAL PEPTIDE PEPTIDASE-LIKE 5
Computational Description: SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR