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GT23348

CSHL Arabidopsis genetrap mutant lines

Original: GT23348

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23348

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15551697 [Map]; Strand: w
      • AT4G32200.1 - [+] show detail - DNA-binding HORMA family protein
        Distance: 0; Region: intron11 (CDS)
    Flanking Genome Sequence: GT23348 - 5-prime edge 
    GACGACATAT GATTATTACA ACATCAGGTA ATTAGAAAAT CATGATTATT 
    CATTTTGTCT TATATCTTAT AATAGTCACT AATAAATATC TGATTTTTAC 
    AAAATATTTT TATGGTGAAA GAAACATCTG ATGGTAGCAA TGAGGGCCTA 
    CAACCAACTT CTTCAAGAAT CTGGTGGAGC TAGTTGTGTC ATGTTTCATG 
    ACACTCCTAT TTTTATAAAT CTTTCGCGTA TTACCTATGT CGCAAATAAA 
    AGATTTTGGT TAACCGCTAA AAGTTGAAAA GAATTGATCA CCAAAAGCTT 
    GTAATTCGAA TATTCGGTTA TGATCTGTAT CTTTGCTAAC TCACTTGTTA 
    CCTAATTGTA GTTCGAATTC GAGTTCTATG TGCTCTTGTT GTCACCTGTT 
    GTCTGTGCAA TAATGGGATC CCAACATCCC CGAGGATGGC CTTGTCGTTA 
    TCAATGGGCC AGATGACAGT AAAGCGAGGT TCAGTACAAA GTGATCATTT 
    CCGAATCGAT TCGTATTTCG AACGTATCTG ACACGTGTCA AATCGCCGCG 
    TCTGTACGCG CGCGTGAAGC TCAGGAACCG AAGCGTCTCG TAGGTTTAAT 
    GATGACCTCG TAGGTTTGTC GCCCAATCGC CTCTATTTAT ATTAGATTAA 
    ACCCTCGGGA AATCATTTTC CGCCGCTTGC AAGAAGAATC TAAGGTAGCT 
    CTCGCTCTCT CCTCTGCGAA TTATTTTGTA CTCTCGATTC TTTATCGATT 
    TTTCCGGCAA TGGGTAAGGT TGTTCA

AT4G32200.1

Model type
Protein coding
Short Description
DNA-binding HORMA family protein
Curator Summary
meiotic asynaptic mutant 2, homologue of ASY1
Computational Description
ASY2; FUNCTIONS IN: DNA binding; INVOLVED IN: synaptonemal complex assembly; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT1G67370.1); Has 963 Blast hits to 893 proteins in 304 species: Archae - 15; Bacteria - 206; Metazoa - 200; Fungi - 133; Plants - 165; Viruses - 16; Other Eukaryotes - 228 (source: NCBI BLink).
Link
InterPro Scan - TAIR