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GT22845

CSHL Arabidopsis genetrap mutant lines

Original: GT22845

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22845

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4952881 [Map]; Strand: w
      • AT3G14740.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G14740.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22845 - 5-prime edge 
    GGATTCATGG GATCACCATC TGTACTTTGA CATACAGCAC ACATAATCCC 
    ATCTTCATCT TCTACTTCTC TATCAGAGAG ATCTAAAGCT TTTCCTTTCC 
    CTAGAGGATC TATATTCTCT TTATCATCAT CTTCTTCTCT CTCGACTAGA 
    GATTCAACAT TTAGAGTTGA CTTTTTCTCA ATTGATTTCT CTTCAACATA 
    AGGCTTATAC TCTACATTTA GATCAAAAGG CGAAAAGGGG TTACCACCAC 
    CGGAGAGAAG ATCGGGATCA ATCGCCCAGA TCCTTTTCTT CGCCGGAAGA 
    CAATGATAGG TGGGATTGGA GTTCTCTGCG TCGTCATCGT CATAATCAAC 
    ACGAGTCTGC TTCCTCTTCT TTGCCGGCAA CTGCAACGAT TTCTTCTCTC 
    TCGA

AT3G14740.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 3447 Blast hits to 3310 proteins in 215 species: Archae - 0; Bacteria - 0; Metazoa - 1911; Fungi - 561; Plants - 635; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14740.2

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR