1. Home
  2. Mutant Lines
  3. GT22571

GT22571

CSHL Arabidopsis genetrap mutant lines

Original: GT22571

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22571

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1973157 [Map]; Strand: c
      • AT3G06437.1 - [+] show detail - pseudogene, hypothetical protein
        Distance: -702; Region: promoter
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: intron7 (CDS)
      • AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon7 (3UTR)
    Flanking Genome Sequence: GT22571 - 5-prime edge 
    CCGTCAGAGA GATCTTGGAG TGAGTTTTGT AGTTTCATCA CCATAGAGTT 
    AAGATATAAC GAATCCTAGA TATCATAAGT GACGTTGTTC TTATGTTGGT 
    TGTTGAAAGC TTTTCAAGCT GGAAGATGTG GCGATGGGGA TATGGATTCA 
    ACAATTCAAC CAGACGATAA AAAGAGTGAA GTACATCAAT GACAAAAGAT 
    TTCATAACAG TGATTGTAAA TCAAATTACA TTCTTGTTCA TTACCAAACT 
    CCTAGACTAA TTTTGTGTCT TTGGGAGAAG CTGCAAAAAG AGAACCAATC 
    TATTTGCTGC GAATAAATCT CTCGAGCATG TACGTATGTA ACTTTTCTGG 
    TTCTGTTTCA CACTTCAGGA GGAAGTTCTC CCAGTTAAAG ACACACTGGC 
    TCGAGTATGT CAGAGTATAT TGGCTATTAT CTGTCTTTGT AGATTCTCTC 
    AATCAGCATA TCTACAAACA TATTCGAACC ATAGTTTATA GGCCAGGAGC 
    GTGTCAAAGG TGGCATTAGT GTCTTATTCA TTGTCCTCGT AAACGTTGTT 
    GCTTTTGTTG TATCGGGGCA CACTTATCCG GATTTATCGA TTATGCAATT 
    GCCCTACTAC ATCACATTAT TATATAAATT TGGTCTTCAA GTTTTTATT

AT3G06437.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06440.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR