1. Home
  2. Mutant Lines
  3. GT22132

GT22132

CSHL Arabidopsis genetrap mutant lines

Original: GT22132

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22132

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4788742 [Map]; Strand: c
      • AT5G14800.1 - [+] show detail - pyrroline-5- carboxylate (P5C) reductase
        Distance: -903; Region: promoter
      • AT5G14800.2 - [+] show detail - pyrroline-5- carboxylate (P5C) reductase
        Distance: -903; Region: promoter
      • AT5G14810.1 - [+] show detail - transposable element gene
        Distance: -259; Region: promoter
    Flanking Genome Sequence: GT22132 - 5-prime edge
    TAAACGATGA AGGGAAATCT AGAAGTCTCT AGAGAGAGAT TACAACCAGA 
    TTATTCGATA ATGAAAGCAT GAGCATAACA TGTTGCTCTT ATACAAAAAG
    GTAAAGAAAG TAAACGTTAA CCACATTAAT AACGATCGCC GTTAACGTCC
    ATTTGCATTG CCAGCTCGCC AGCTCACAAC ACACGTGCTT TGCTTAACAT
    CCCTGACTTC ACATTGCCAG CTCGCCAGCT CACAACACGT GCTTTGCTTA
    ACATCCCTGA CTTCGCATTG CCAGCTCGCC AGCTCACAAC ACACGTGCTT
    TGCTTAACAT CCCTGACTTC ACATGTGTGA GCTTGACCTT CTAGAACGCT
    ATATCAAATC ACATGTGAGT CAGCTACACT TCAGTTTTCC TATAACAAAT
    TCTCAAATGA CCAAGTTCCA CACCGGCATT GTTTTTCAAA AAAAAGGGGG
    GGGGGGGAAA AAAACCAAAA CCAAAATTTT TGGTTGCCAA AACCAACCCC
    CCCAAAACCC AAAAAAAAAC CCCCCCACCC CCTTTCCCCC CAAAAAATTC
    CCCGAACCTT AACCCCTTTT CAAAAAATAA AACCGCCCAA AAATGGCCTT
    TGCCCTTCCA AACCCCACAA AAAAACCAAC AAGGCCCCCC CTTAAATGAC
    CCCCCCAAAA AAGCCAAACC CCCCAATTCC ACCCTTTAAA AAAAAACAAA
    AAAAAAAA

AT5G14800.1

Model type
Protein coding
Short Description
pyrroline-5- carboxylate (P5C) reductase
Curator Summary
Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.
Computational Description
pyrroline-5- carboxylate (P5C) reductase (P5CR); FUNCTIONS IN: pyrroline-5-carboxylate reductase activity; INVOLVED IN: response to salt stress, response to heat, proline biosynthetic process; LOCATED IN: cell wall, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7885 Blast hits to 7882 proteins in 2434 species: Archae - 115; Bacteria - 5234; Metazoa - 373; Fungi - 241; Plants - 70; Viruses - 0; Other Eukaryotes - 1852 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G14800.2

Model type
Protein coding
Short Description
pyrroline-5- carboxylate (P5C) reductase
Curator Summary
Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.
Computational Description
pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G14810.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
retrotransposon family
Link
InterPro Scan - TAIR