Home
Mutant Lines
GT21554

GT21554

CSHL Arabidopsis genetrap mutant lines

Original: GT21554

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21554

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 142135 [Map]; Strand: c
- AT4G00320.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: 492; Region: intergenic
- AT4G00330.1 - [+] show detail - calmodulin-binding receptor-like cytoplasmic kinase 2
  Distance: 466; Region: intergenic

GGAGCATTGA ATCCATGTGC AGACACCTCT TTCGGTACAG GATTATGAAT 
AATATTGTAT GTCTAAGGCT CAGTAACTTA ACACTATCTC GGATAGCCGC 
GGTCGAGAAG TTGCTATATT TGTCCAAATG TTAGATCTCA GTCACAATGA 
GCTTCATTCA ACTGAAGGTA CGTTATGTAG TGTTTTCTAA CGCTTTTTGA 
GTCTTGTTCA ATATTAGTTG TTGCATCTTT GGTGCTTAGA GGTTTGATGA 
AACTGAAGCA GTTAGATATT AGAGTCAACG ACCTAATATT TGCAGACCTA 
ACTAAATAAA TTATGGTGTT TGATTTGGTT TAACCTGACA AGCAAGTTTC 
TATCACGTCA AATTAAAAAC ATAAAAAACA CAAATTCATT ACTAAAACCA 
ACAAAAGAAC ACTAAACGTT CACTGGTTTG TAAGATAAAA GCCAGTAAAG 
AGAAGAAAAA GGAAATAACA AAAGGAAGAA ACAGAGTTTA GAGTTTTTAG 
CAAACTTGTA GCAGCTTGAT TGCCTGAAAC ATGTCCATGG CTGAGAAACC 
AGAAAAGATC ATCTAACGGA AAGTAAATGA CAAGTTGATG TTATCAGAGA 
TTATTTGGAC CTCACACTTG GCTGAAGCTA CTCTAGGAAG CTTCTTAAGT 
TTCTTGAACA CCTTC

AT4G00320.1

Model type: Protein coding
Short Description: F-box/RNI-like superfamily protein
Computational Description: F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G41830.1); Has 1728 Blast hits to 1676 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00330.1

Model type: Protein coding
Short Description: calmodulin-binding receptor-like cytoplasmic kinase 2
Curator Summary: high overall homology to CRCK1
Computational Description: calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 1 (TAIR:AT5G58940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR