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GT21438

CSHL Arabidopsis genetrap mutant lines

Original: GT21438

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21438

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 117688 [Map]; Strand: c
      • AT2G01200.1 - [+] show detail - indole-3-acetic acid inducible 32
        Distance: -329; Region: promoter
      • AT2G01200.2 - [+] show detail - indole-3-acetic acid inducible 32
        Distance: -330; Region: promoter
    Flanking Genome Sequence: GT21438 - 5-prime edge
    AGCAAGAAGC CAGACATACA TTCTTCCAAA TATTAAATGT TATACATAAC 
    ATTTCAGAAT CTTTCTGAAC AATATTATAG CCTTCAAAGT CTCTTGAAAA
    AACAAGATAG AGAGATGATG ATCAAAAAAG TGATACATTT ACAAAATGAA
    ATGAATGATA ATAATATGAT ATAAGATCCA GGAAAATGGT AAAGCACTAC
    ATGTATCAAT TGCAACTATA TAATGTAAAA TCCCACCAAG AAGCACTATT
    TATTTGTTTT TTTAATTTAC TCACACAACA CTTTTAAACA CAACCCATAA
    TACCAAACTT AACATGACAC CAGACTCTTT TTTTTGATGC AGCAACTTGT
    AAAAGAAGAG AAGAAAAAAG AAGTAAAAAT TATATATTTA TACGTTTAAA
    AACCAACCCG GGGTTTTCTT CCTCCAAAAT TTTGTGGTTC ATCTCACTCG
    ACC

AT2G01200.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 32
Curator Summary
Belongs to auxin inducible gene family.
Computational Description
indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01200.2

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 32
Curator Summary
Belongs to auxin inducible gene family.
Computational Description
indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR