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GT21157

CSHL Arabidopsis genetrap mutant lines

Original: GT21157

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21157

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 19328 [Map]; Strand: c
      • AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT21157 - 5-prime edge 
    GGAAGCATCA TAGAAGGCAT ATTCATTCTG CTCATCATGC TCACTTGTGC 
    TTGAAGTTGC TTCAAATACT CTATCACTTC ATCCAACATA GATGCTTTAT 
    CCGTCTATAG TTCCAAAATT AACGATTTAT ATATCAAGCC TCTTTGGTAT 
    CTACTATAAT TAACCAAACC AATGTTACGG AGCATGTGTG TAATGTAGAT 
    TGTGTTGATT TTTGAGTCGA CAGCCACAAG GCATATAATA ATTAAAGGTG 
    TATATGAATG GACCAACCGG ACCAAGTAAT AAAGTGATGT AAAATAAGTT 
    TTTAGGGGAC AAGCAAATAA GAGATTGATG AACATAAGTG TGTGGAGTAG 
    AATCATCGTA TGAGGTCCAT TTCTTTAGAT GCATTCACTT CACTTTGGTC 
    CACCACCCTT TTTCATATTA TCCCCTCTAT TTTCATGTAT ACCTAGCTAG 
    CATCTATTTT TTTACTATAC GTACGCATAT GACTTTTATT TAGCCACGTA 
    CACTAGTTTA TGTAAAACGA CTTGCGTACC TTGCTGGAAT TGGGAACCAG 
    TTTTTGCAAA GTCTTCATCC TTTGATTGAT TTTATCTCTC CTCTTCTGTA 
    ATAAAATCAA CCAAGGATAA AACCCAGGGG GTCATGCATG TGTAACAGTA 
    GACGAATAAC ATGAAACTTT TTTTGAAAAA TAAAATAATG GTTGAGTGAA 
    TCATTACACG TTCGGATTGG TTATGAATAG CAGCAGCTCT GCTTCTCTTG 
    GTTGAAACTG ATGATTTTCC TCCGGCTT

AT4G00050.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR