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GT21137

CSHL Arabidopsis genetrap mutant lines

Original: GT21137

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21137

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24793290 [Map]; Strand: w
      • AT5G61690.1 - [+] show detail - ABC2 homolog 15
        Distance: 0; Region: exon1 (CDS)
      • AT5G61700.1 - [+] show detail - ABC2 homolog 16
        Distance: -574; Region: promoter
    Flanking Genome Sequence: GT21137 - 5-prime edge 
    CAAGGAAGCT TCACAAAGAA CTTGTCCTCA CAAGGAAGAA TCGGTGGGGA 
    TACCAATAGT GTAGGATCAG TGATATTCTT GTACGCACTC GAGGATGCGT 
    TGCTTGCTTT CATGGCTTCA TCTATACAAA AGATGAGAAG GATGAAGAAG 
    AATGAAGAGA AGATTTGAAG ACACGTGGCT CTCTTGTTCC GCCATGAAAG 
    CAATAGATTC TTCCCGAACA ACGCCGTGAA CTGCTGGTAG AGAAGCGGCA 
    AGCCTTCTTG CAAAATCATT ATCAAGTTTT TAAAAAAAAA ATCTTTCTTT 
    TTCCAAGTAA ATTGTTTGTC TTAGGAAAAA AAAAACAAAA TTTTTATCTT 
    AAAAGGTTCC CGCCCCCCCC CCAAAAAAGG GTTGGCCCCT ATTTATTTAA 
    AAGAAAAAAA AATTTTTGGG CAATTTTTTT GGGTGGCCAA ATTTTCGCCC 
    CCGGTTGGAA AAAGGGGAAA AATAAAAACC CCGAAATTTT TTCATATTTA 
    TTGGGGACCC ACATATTTTT TGGGGCCTAA AAAACACGCC ACGTTTAAGG 
    GAGAAAAGAA TTTTTTTAAT TTGGGGGGGG AAAAAAAAAA AAGACAAAAG 
    GGG

AT5G61690.1

Model type
Protein coding
Short Description
ABC2 homolog 15
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 15 (ATH15); CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61700.1

Model type
Protein coding
Short Description
ABC2 homolog 16
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 16 (ATH16); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 14 (TAIR:AT5G61740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR