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GT21096

CSHL Arabidopsis genetrap mutant lines

Original: GT21096

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21096

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11114119 [Map]; Strand: c
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT21096 - 5-prime edge 
    CCAAGGGGTA AAGGGCTGGA TGCTTTTGAA GTTGGATTTG GAGAAGGCTT 
    ATGATAGGAT CCGATGGGAT TATCTGGAGG ATACACTTAT TTCTGCGGGG 
    TTCCCCGAAG TTTGGGTAAG ATGGATAATG TGCTGTGTGT CGGGCCCGGA 
    GATGAGTTTG TTGTGGAATG GAGAGAGAAC AGACTCCTTC AAGCCGTTAC 
    GGGGCCTCCG CCAGGGTGAT CCCTTATCTC CGTATTTGTT TGTGCTATGT 
    ATGGAGAGGC TTTGTCACTT GATTGAGCGA TCGATTGATA ACAAACAGTG 
    GAAGCCCATT AGTTTGTCTC AAGGCGGTCC CAAGTTATCT CATATCTGTT 
    TTGCTGACGA TCTAATTTTA TTTGGGGAGG CTTCAGTAAT GCAGATAAGA 
    GTGATTCGGA AGGTGCTGGA GACATTTTGT ATAGCCTCTG GTCAAAAGAT 
    TAGCCTGGAG AAGTCAAAAA TATTTTTTTC AGGGAATGTC TCACGTGATC 
    TGAGCAAACT GATAAGTGAG GAGAGCGGGA TTAAAGCAAC AAAAGACTTG 
    GGTAAATATC TTGGGATGCC AGTACTTCAT AAACGCATCA ATAAGGATAC 
    TTTCAGTGAA CTTTTGGAG

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR