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GT20828

CSHL Arabidopsis genetrap mutant lines

Original: GT20828

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20828

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 300416 [Map]; Strand: w
      • AT2G01670.1 - [+] show detail - nudix hydrolase homolog 17
        Distance: -2315; Region: intergenic
      • AT2G01680.1 - [+] show detail - Ankyrin repeat family protein
        Distance: -5969; Region: intergenic
    Flanking Genome Sequence: GT20828 - 5-prime edge 
    CTTTCTCCCT GACGACTATT ATTGTAAGTT AGACTAATCG GGTGCATAAG 
    AAAGAAGAAG TTAGAATTAT CGAATATGAA ACCTTCCTGC AAATGTGTCG 
    ATATGAATTG TTTTAATGGT TCAACCATCA TAATTACATT TTAGCCACCG 
    ATTTAGAATC TTTCCTCTTT AGTCACCCAA AAAGGATTTT CTTTCATCAC 
    GACACATGAA ACTTAACGCA TAATAATGAC CTATATTACG CATCATGGTT 
    CTCCTCTCTC GA

AT2G01670.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 17
Computational Description
nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01680.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink).
Link
InterPro Scan - TAIR