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GT20579

CSHL Arabidopsis genetrap mutant lines

Original: GT20579

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20579

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23321996 [Map]; Strand: w
      • AT3G63110.1 - [+] show detail - isopentenyltransferase 3
        Distance: -2456; Region: intergenic
      • AT3G63120.1 - [+] show detail - cyclin p1;1
        Distance: 960; Region: intergenic
    Flanking Genome Sequence: GT20579 - 5-prime edge 
    CTTTCTCCCT GCCTAAATGT TTTTCTTTTT ATTCCATTTT TTCCAAGTAA 
    ATTTTTTTGG TTTTCGAAAA TAGATTTCTT TTAACATTCA AAATTAAAAC 
    CAAGCCTGCG CCTTTAGGAT TTAAGCACAC GATCAGTATA TTTTTGTTTT 
    ATGTAAAAAC ATAATATTAT TACGTTTGTG TCAAACTTAA TACAAAATAT 
    TTTTGTGTCA TCCTCCTTCT TCTCACTCGA

AT3G63110.1

Model type
Protein coding
Short Description
isopentenyltransferase 3
Curator Summary
Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.
Computational Description
isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63120.1

Model type
Protein coding
Short Description
cyclin p1;1
Computational Description
cyclin p1;1 (CYCP1;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 1179 Blast hits to 1177 proteins in 221 species: Archae - 0; Bacteria - 18; Metazoa - 258; Fungi - 438; Plants - 231; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
Link
InterPro Scan - TAIR