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GT20456

CSHL Arabidopsis genetrap mutant lines

Original: GT20456

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20456

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28672822 [Map]; Strand: w
      • AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT20456 - 5-prime edge 
    AAACGGCAAG GTGTGTTTGG TGTTGACATC CACACCACAC GTACAGGTTT 
    ATATCAAATC TATCACATCT AAACTGCTCT CTCCCCTGTC CTCCCCATAC 
    TAAGCCAAAC AACATAGTGA CAATACTATT GAAACAAAAC ACATGAAATG 
    GGAAAAAAAA AGTTAAATAT TTCGTTAAAC CTTTCTTTTC AACTTGGGGA 
    TTTAAAAAGT TAACACATTA ATGGAGAACA AAAACATCAA ATTTCTATTA 
    CATTCGCAAA GTTAAAAAGA ATTTAATGTT ATAAAAAATG GACGTGTGGG 
    AATAAAAGTA ACAGGGTTTA AATTACTATT TTCACACACT AGTAGTATAA 
    AATTTTTGGT TTCAAAAAGT CAACTCGTAA ATTGACGAGA AAAAAAATAC 
    AAATTTTTTT A

AT1G76420.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator Summary
Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.
Computational Description
CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR